Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 Y_RNA.526-201ENST00000384572 110 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 Y_RNA.551-201ENST00000384661 102 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-1179P-201ENST00000384667 107 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 AL138885.1-201ENST00000405921 675 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-325P-201ENST00000411132 105 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 AC063979.1-201ENST00000415539 377 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 RPL12P46-201ENST00000436610 195 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-1023P-201ENST00000516137 106 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-914P-201ENST00000516749 109 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 RN7SKP234-201ENST00000517173 224 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 MIR548AC-201ENST00000585049 88 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 MIR7151-201ENST00000617477 60 ntBASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYNGAP1Q96PV0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-770P-201ENST00000363929 105 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 RNU4-50P-201ENST00000364361 141 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-1062P-201ENST00000383908 107 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 SNORD66.1-201ENST00000391230 76 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 RNU2-64P-201ENST00000411315 191 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 RPL7AP73-201ENST00000413490 353 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AL445584.1-201ENST00000431451 330 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 RPS29P7-201ENST00000439662 171 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 FTH1P9-201ENST00000513251 355 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AC090517.1-201ENST00000569307 266 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AC104984.5-201ENST00000586878 94 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 VN1R91P-201ENST00000594377 169 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AC064801.1-201ENST00000612025 407 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 PRO1804-201ENST00000623780 2050 ntBASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.76□□□□□ -1.65
SYNGAP1Q96PV0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 Y_RNA.117-201ENST00000363294 101 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 RNU6-174P-201ENST00000410406 106 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 DAP3P1-201ENST00000441522 278 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 AL500522.2-201ENST00000448562 343 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 HMGN2P13-201ENST00000476476 274 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 AC104164.2-201ENST00000496953 495 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 RN7SKP289-201ENST00000517244 295 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 AL137100.2-201ENST00000555786 315 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 AL512643.1-201ENST00000635735 524 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 PHKBP1-201ENST00000450951 1951 ntBASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SYNGAP1Q96PV0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 MIR548M-201ENST00000408260 86 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 CKS1BP5-201ENST00000434172 273 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 RPS29P19-201ENST00000479709 171 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 GZMAP1-201ENST00000503054 631 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 AC093852.1-201ENST00000503587 266 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 PPBPP1-201ENST00000510807 373 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 AC113155.1-201ENST00000511141 769 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 MTND1P19-201ENST00000511780 315 ntBASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.74□□□□□ -1.65
SYNGAP1Q96PV0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms