Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2□□□□□ -2.09
COL21A1Q96P44 AL606517.1-201ENST00000446914 387 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 RPL23AP7-203ENST00000449021 469 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AL353705.4-201ENST00000449661 238 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AL021397.1-201ENST00000451806 248 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2□□□□□ -2.09
COL21A1Q96P44 AC090515.1-201ENST00000465295 476 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AC132942.1-201ENST00000486753 483 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 RPS29P21-201ENST00000496272 170 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 RPF2P2-201ENST00000504693 896 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL21A1Q96P44 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2□□□□□ -2.09
COL21A1Q96P44 RNU6-991P-201ENST00000516168 107 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 SCARNA16.3-201ENST00000516595 184 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 RNU6-64P-201ENST00000517119 105 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AC025755.1-201ENST00000521306 278 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AP000907.2-201ENST00000530827 353 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 MTCO2P15-201ENST00000532655 656 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2□□□□□ -2.09
COL21A1Q96P44 AC021739.1-201ENST00000559631 174 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2□□□□□ -2.09
COL21A1Q96P44 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2□□□□□ -2.09
COL21A1Q96P44 AC097468.3-201ENST00000607956 456 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2□□□□□ -2.09
COL21A1Q96P44 AP000484.1-201ENST00000620067 1252 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AC012150.2-201ENST00000621300 544 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL21A1Q96P44 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL21A1Q96P44 ADAM3A-203ENST00000461344 2157 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 AL109809.4-201ENST00000603520 2185 ntBASIC2□□□□□ -2.09
COL21A1Q96P44 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL21A1Q96P44 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL21A1Q96P44 UBE2L2-201ENST00000254302 429 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 RNA5SP99-201ENST00000364020 114 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 RNA5SP88-201ENST00000365560 109 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 RNU6-817P-201ENST00000391083 104 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL21A1Q96P44 U6atac.2-201ENST00000408644 118 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 RNU6-584P-201ENST00000410350 95 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 RN7SKP192-201ENST00000411291 327 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL353729.1-201ENST00000425044 720 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AC010153.1-201ENST00000432862 727 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 RPL36AP53-201ENST00000432891 316 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 MTATP6P30-201ENST00000443540 664 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 DUXAP8-207ENST00000456786 622 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL441985.1-201ENST00000457727 251 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL21A1Q96P44 IGKV3-31-201ENST00000523109 329 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AP001372.4-201ENST00000524889 472 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 OR11H5P-201ENST00000554039 926 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 MTND1P8-201ENST00000571424 950 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 MIR5571-201ENST00000577998 113 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 MIR4293-201ENST00000584305 78 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 MIR4760-201ENST00000585040 80 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 RPS15AP11-201ENST00000594193 385 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL670379.6-201ENST00000603753 252 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL670379.11-201ENST00000604059 253 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AC008162.1-201ENST00000604718 254 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL670379.1-201ENST00000604752 252 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL670379.5-201ENST00000605253 252 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL670379.12-201ENST00000605291 253 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL670379.8-201ENST00000605353 252 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL670379.7-201ENST00000605823 252 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AC090970.3-201ENST00000612566 866 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
COL21A1Q96P44 HMGB1P24-202ENST00000615653 685 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AC023510.2-201ENST00000622162 746 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 FRG1KP-201ENST00000623592 341 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 AL078595.3-201ENST00000623815 1166 ntBASIC1.99□□□□□ -2.09
COL21A1Q96P44 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.98□□□□□ -2.09
COL21A1Q96P44 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
COL21A1Q96P44 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
COL21A1Q96P44 RNU6-486P-201ENST00000363116 107 ntBASIC1.98□□□□□ -2.09
COL21A1Q96P44 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.98□□□□□ -2.09
COL21A1Q96P44 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
COL21A1Q96P44 RNU6-220P-201ENST00000390919 107 ntBASIC1.98□□□□□ -2.09
COL21A1Q96P44 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.98□□□□□ -2.09
COL21A1Q96P44 RN7SKP223-201ENST00000410582 62 ntBASIC1.98□□□□□ -2.09
COL21A1Q96P44 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.98□□□□□ -2.09
COL21A1Q96P44 MTCO2P21-201ENST00000419780 677 ntBASIC1.98□□□□□ -2.09
COL21A1Q96P44 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.98□□□□□ -2.09
COL21A1Q96P44 DPH3P2-201ENST00000422618 250 ntBASIC1.98□□□□□ -2.09
COL21A1Q96P44 LARP1BP3-201ENST00000437229 869 ntBASIC1.98□□□□□ -2.09
COL21A1Q96P44 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
COL21A1Q96P44 AL118520.1-201ENST00000450770 291 ntBASIC1.98□□□□□ -2.09
COL21A1Q96P44 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.98□□□□□ -2.09
COL21A1Q96P44 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.98□□□□□ -2.09
COL21A1Q96P44 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms