Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC024614.3-201ENST00000637860 256 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 AC004520.1-201ENST00000608362 1413 ntBASIC4.02□□□□□ -1.77
CHMP4CQ96CF2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 RNU6-1035P-201ENST00000384477 107 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 RNA5SP118-201ENST00000410385 109 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 RNU6-373P-201ENST00000411247 98 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 RBMY2UP-201ENST00000453474 324 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AP003122.3-201ENST00000526316 255 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AC084851.1-201ENST00000529105 249 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 MIR1273C-201ENST00000578669 77 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 MIR5692A1-201ENST00000580523 69 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 MIR548AC-201ENST00000585049 88 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AC010525.2-201ENST00000590920 195 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AL442067.2-201ENST00000614033 363 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AC006111.3-201ENST00000622137 383 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AC099506.2-201ENST00000623074 221 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 AC073308.1-201ENST00000623696 305 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 MTND5P1-201ENST00000445440 1375 ntBASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHMP4CQ96CF2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CHMP4CQ96CF2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CHMP4CQ96CF2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHMP4CQ96CF2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CHMP4CQ96CF2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4□□□□□ -1.77
CHMP4CQ96CF2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CHMP4CQ96CF2 HSPA8P4-201ENST00000511877 1920 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CHMP4CQ96CF2 FTLP6-201ENST00000355274 422 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 Y_RNA.33-201ENST00000362591 102 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 RNU1-33P-201ENST00000364249 162 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 RNU6-1283P-201ENST00000365314 105 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 RNU6-395P-201ENST00000365662 106 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHMP4CQ96CF2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4□□□□□ -1.77
CHMP4CQ96CF2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHMP4CQ96CF2 AL592114.1-201ENST00000403842 483 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 AL356968.1-201ENST00000416622 474 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 AL158156.1-201ENST00000422509 473 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4□□□□□ -1.77
CHMP4CQ96CF2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4□□□□□ -1.77
CHMP4CQ96CF2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4□□□□□ -1.77
CHMP4CQ96CF2 WASF1P1-201ENST00000447560 1131 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 SCARNA18-201ENST00000459004 134 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 RPL21P41-201ENST00000459863 264 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 AC012181.1-201ENST00000479895 423 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 LRRC34P2-201ENST00000514850 553 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 RNU6-928P-201ENST00000516876 104 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4□□□□□ -1.77
CHMP4CQ96CF2 AL138976.2-201ENST00000563989 694 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4□□□□□ -1.77
CHMP4CQ96CF2 FTX_3.1-201ENST00000610451 147 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 RMST_3.1-201ENST00000611651 109 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 SNORD39.4-201ENST00000620099 78 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 SNORA50A-202ENST00000629536 136 ntBASIC4□□□□□ -1.77
CHMP4CQ96CF2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHMP4CQ96CF2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
CHMP4CQ96CF2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 RNA5SP383-201ENST00000362934 120 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 RNU6-715P-201ENST00000365204 103 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 MIR491-201ENST00000384877 84 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 MIR591-201ENST00000385290 95 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 RNU6-1025P-201ENST00000410629 104 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 EEF1A1P40-201ENST00000412883 573 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 Z99755.1-201ENST00000414048 380 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 MTND3P16-201ENST00000452205 344 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 RPL12P25-201ENST00000455592 494 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 HMGN1P18-201ENST00000457642 277 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 RPL21P99-201ENST00000480369 423 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 AC069439.1-201ENST00000494739 167 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 AC091885.1-201ENST00000506658 268 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 PSMA2P1-201ENST00000526365 646 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 BNIP3P6-201ENST00000549284 499 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 AMZ2P1-203ENST00000565833 850 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 MTCO3P24-201ENST00000572729 782 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 HSPE1P7-201ENST00000604681 321 ntBASIC3.99□□□□□ -1.77
CHMP4CQ96CF2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms