Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC063979.1-201ENST00000415539 377 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 RPL21P90-201ENST00000415692 466 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 RPL17P36-201ENST00000420302 549 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 RPL32P28-201ENST00000443577 397 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 Y_RNA.635-201ENST00000459041 101 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 AC087884.1-201ENST00000469738 328 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 MTND5P5-201ENST00000503764 376 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 TBCAP3-201ENST00000512475 312 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 RNU6-1315P-201ENST00000517187 99 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 COPS8P3-201ENST00000526024 482 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 AC008011.1-201ENST00000545989 227 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 TGIF1P1-201ENST00000558095 802 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 AC093227.2-201ENST00000589357 285 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 APOOP1-201ENST00000604695 592 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 ZNF826P-207ENST00000622273 1910 ntBASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.83□□□□□ -1.8
CCHCR1Q8TD31 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AC008568.2-201ENST00000623862 2313 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 RNU6-600P-201ENST00000362524 99 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 RNA5SP295-201ENST00000362655 121 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 Y_RNA.394-201ENST00000383942 103 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 Y_RNA.480-201ENST00000384364 102 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 MIR301A-201ENST00000385261 86 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 MIR548F5-201ENST00000408421 86 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 RNU2-33P-201ENST00000410344 192 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 RNU4-14P-201ENST00000410858 122 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AL354751.2-201ENST00000415471 210 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 BTF3L4P3-201ENST00000418879 476 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 MTND1P17-201ENST00000448961 204 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AC107399.1-201ENST00000451226 265 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 MRPS31P2-201ENST00000451581 518 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 FABP5P15-201ENST00000453566 214 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AP002884.2-201ENST00000471647 395 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 VN1R17P-201ENST00000472048 1090 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 RPS4XP22-201ENST00000480755 780 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 RPS4XP13-201ENST00000483219 789 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AL160314.1-201ENST00000490836 438 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AC079140.5-201ENST00000507882 310 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 RNU6-273P-201ENST00000516937 96 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 RNU6-143P-201ENST00000516942 93 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AP003122.3-201ENST00000526316 255 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AP005639.2-201ENST00000527592 928 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AC084851.1-201ENST00000529105 249 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 MIR4790-201ENST00000577799 79 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 MIR1273C-201ENST00000578669 77 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 LRRC37A5P-203ENST00000580181 585 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 MIR3690-201ENST00000580266 75 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 MIR548AC-201ENST00000585049 88 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 PLCE1P1-201ENST00000622094 305 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 AL512643.1-201ENST00000635735 524 ntBASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.82□□□□□ -1.8
CCHCR1Q8TD31 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 ZNF519P1-201ENST00000449011 1626 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 RNU6-1227P-201ENST00000383981 107 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 MIR1302-11-201ENST00000408051 138 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 MIR1302-9-201ENST00000408365 138 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 MIR1302-10-201ENST00000408734 138 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 RN7SKP156-201ENST00000410308 342 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 RNU6-607P-201ENST00000411283 108 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AC017079.2-201ENST00000416102 485 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AF228730.4-201ENST00000421457 183 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AL139247.1-201ENST00000422768 325 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AL591419.1-201ENST00000427423 339 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AC018644.1-201ENST00000429934 551 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AC010401.1-201ENST00000463867 348 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AC008526.1-201ENST00000509149 338 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AC008716.1-201ENST00000511084 513 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 RNU6-559P-201ENST00000516151 98 ntBASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.81□□□□□ -1.8
CCHCR1Q8TD31 AC106785.1-201ENST00000565935 262 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms