Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.43□□□□□ -1.86
HERC6Q8IVU3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.43□□□□□ -1.86
HERC6Q8IVU3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 MTND4P14-201ENST00000435799 1354 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 RNU6-270P-201ENST00000364131 105 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 RNU6-1322P-201ENST00000364309 107 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 SNORA14A-201ENST00000364773 135 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 RNU6-517P-201ENST00000384362 110 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 MIR181A1-201ENST00000385026 110 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AL354719.1-201ENST00000406535 843 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 RNU6-648P-201ENST00000410190 107 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 MRPL50P2-201ENST00000416821 482 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AL139413.1-201ENST00000421309 217 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AL139281.1-201ENST00000422120 335 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 MTND1P4-201ENST00000435196 415 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 RPL32P28-201ENST00000443577 397 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 MIR1273C-201ENST00000578669 77 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC008521.1-201ENST00000587471 187 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AL359880.1-201ENST00000621879 266 ntBASIC3.42□□□□□ -1.86
HERC6Q8IVU3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.42□□□□□ -1.86
HERC6Q8IVU3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 MTND4P35-201ENST00000604257 1375 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 Y_RNA.6-201ENST00000362350 114 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 RNA5SP252-201ENST00000391131 119 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 CISD1P1-201ENST00000393907 327 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 RNU2-29P-201ENST00000410423 189 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 RNA5SP229-201ENST00000410809 99 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 RNA5SP31-201ENST00000411144 127 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 UBE2V1P10-201ENST00000414685 269 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 AL596276.1-201ENST00000434465 418 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 AC003071.1-201ENST00000451219 789 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 RPL26P9-201ENST00000457466 433 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 AC128713.1-201ENST00000471495 306 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 EIF4EP3-201ENST00000498782 656 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 AF213884.2-201ENST00000510417 903 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 AL512310.1-201ENST00000548639 172 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 MIR6715A-201ENST00000615929 79 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 CR381653.2-201ENST00000624041 768 ntBASIC3.41□□□□□ -1.86
HERC6Q8IVU3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.41□□□□□ -1.86
HERC6Q8IVU3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.4□□□□□ -1.86
HERC6Q8IVU3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.4□□□□□ -1.86
HERC6Q8IVU3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HERC6Q8IVU3 RNU6-884P-201ENST00000363889 107 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 RNU6-395P-201ENST00000365662 106 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 RPL26P27-201ENST00000414397 437 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 OR6C66P-201ENST00000414917 930 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 MTCYBP5-201ENST00000423752 1135 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AL160275.3-201ENST00000423876 471 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 HMGB1P9-201ENST00000429856 646 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC022018.1-201ENST00000430685 241 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AL139132.1-201ENST00000431587 344 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.4□□□□□ -1.87
HERC6Q8IVU3 RPS29P15-201ENST00000458329 171 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 RNU7-23P-201ENST00000459465 62 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 AC026801.1-201ENST00000497178 464 ntBASIC3.4□□□□□ -1.87
HERC6Q8IVU3 RBBP4P6-201ENST00000508098 202 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms