Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.18□□□□□ -2.38
VPS13CQ709C8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.18□□□□□ -2.38
VPS13CQ709C8 AL773524.1-201ENST00000614065 229 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 AC022079.2-201ENST00000619739 566 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 VPS26BP1-201ENST00000417155 755 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 CENPUP2-201ENST00000555897 1186 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 RNU6-1072P-201ENST00000384703 107 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 RNU6-443P-201ENST00000384780 107 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 MIR601-201ENST00000385256 79 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 HMGN2P21-201ENST00000447764 270 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 AC134050.1-201ENST00000495088 933 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 VN1R82P-201ENST00000601481 356 ntBASIC0.18□□□□□ -2.38
VPS13CQ709C8 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.18□□□□□ -2.38
VPS13CQ709C8 RNU6-833P-201ENST00000363486 107 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
VPS13CQ709C8 VN1R36P-201ENST00000414936 291 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AC079140.2-201ENST00000506193 142 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 HMGB1P14-201ENST00000557424 591 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS13CQ709C8 MIR4529-201ENST00000578110 78 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.17□□□□□ -2.38
VPS13CQ709C8 Y_RNA.804-201ENST00000615262 101 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AC009509.4-201ENST00000619202 509 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 RNU6-50P-201ENST00000362356 103 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AC114737.2-201ENST00000421583 173 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.17□□□□□ -2.38
VPS13CQ709C8 Y_RNA.659-201ENST00000515994 113 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS13CQ709C8 AC141557.1-201ENST00000540982 400 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AP003717.3-201ENST00000544832 1180 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AC090115.3-201ENST00000553218 849 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
VPS13CQ709C8 SNORA14A-201ENST00000364773 135 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 RPS3AP36-201ENST00000398190 775 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 MIR938-201ENST00000401216 83 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.17□□□□□ -2.38
VPS13CQ709C8 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.17□□□□□ -2.38
VPS13CQ709C8 AC098583.1-201ENST00000480875 255 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AP001269.3-201ENST00000588718 329 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AC078899.2-201ENST00000595282 212 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AL365204.3-201ENST00000612448 685 ntBASIC0.17□□□□□ -2.38
VPS13CQ709C8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.16□□□□□ -2.38
VPS13CQ709C8 AC090616.3-201ENST00000582184 217 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 AP001180.6-201ENST00000584918 159 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 AC130454.1-201ENST00000622948 401 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 Y_RNA.514-201ENST00000384528 112 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.16□□□□□ -2.38
VPS13CQ709C8 RNU4-65P-201ENST00000410473 140 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 LDHBP3-201ENST00000514909 822 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 AP005639.2-201ENST00000527592 928 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 AC074051.3-201ENST00000570238 358 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 MIR4667-201ENST00000578933 66 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 MIR4305-201ENST00000583252 102 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 AP001350.1-201ENST00000601906 1524 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 RPS3AP37-201ENST00000419176 745 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 HMGN2P22-201ENST00000427588 175 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 RPL36AP53-201ENST00000432891 316 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.16□□□□□ -2.38
VPS13CQ709C8 AC016925.2-201ENST00000605108 242 ntBASIC0.16□□□□□ -2.38
VPS13CQ709C8 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.16□□□□□ -2.38
VPS13CQ709C8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.16□□□□□ -2.38
VPS13CQ709C8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 UBL5P1-201ENST00000507979 193 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 FRG1HP-204ENST00000617940 757 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 Y_RNA.288-201ENST00000364854 92 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 RNU6-1077P-201ENST00000410506 102 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 AC016717.1-201ENST00000448918 286 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 RNU6-1334P-201ENST00000516032 105 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
VPS13CQ709C8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 NF1P3-201ENST00000457709 450 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.15□□□□□ -2.39
VPS13CQ709C8 MIR3690-201ENST00000580266 75 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 MIR4661-201ENST00000582720 75 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 BNIP3P16-201ENST00000589779 534 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 HSPE1P19-201ENST00000603327 295 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 LLPHP1-201ENST00000603571 367 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 AC091925.2-201ENST00000625059 256 ntBASIC0.15□□□□□ -2.39
VPS13CQ709C8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
VPS13CQ709C8 RNU2-71P-201ENST00000411395 189 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.14□□□□□ -2.39
VPS13CQ709C8 RSU1P2-202ENST00000437884 485 ntBASIC0.14□□□□□ -2.39
VPS13CQ709C8 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms