Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MIR1273C-201ENST00000578669 77 ntBASIC3.41□□□□□ -1.86
PTCHD4Q6ZW05 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.41□□□□□ -1.86
PTCHD4Q6ZW05 AC008962.1-201ENST00000605729 304 ntBASIC3.41□□□□□ -1.86
PTCHD4Q6ZW05 MIR6500-201ENST00000622700 86 ntBASIC3.41□□□□□ -1.86
PTCHD4Q6ZW05 AC112484.5-201ENST00000624189 228 ntBASIC3.41□□□□□ -1.86
PTCHD4Q6ZW05 MIR6830-201ENST00000636015 70 ntBASIC3.41□□□□□ -1.86
PTCHD4Q6ZW05 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD4Q6ZW05 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCHD4Q6ZW05 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PTCHD4Q6ZW05 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
PTCHD4Q6ZW05 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
PTCHD4Q6ZW05 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 ZNF807-201ENST00000328088 1707 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 RPL32P3-201ENST00000359025 275 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 Y_RNA.135-201ENST00000363439 95 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 Y_RNA.259-201ENST00000364619 101 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 Y_RNA.431-201ENST00000384086 102 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-1179P-201ENST00000384667 107 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 RN7SKP158-201ENST00000410453 326 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 RPL37P10-201ENST00000412884 288 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 RPL23AP69-201ENST00000431134 458 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC009237.8-201ENST00000445492 379 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC068587.1-201ENST00000483613 781 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 RPS27P27-201ENST00000498779 255 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 RNA5SP291-201ENST00000517222 105 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AP003122.3-201ENST00000526316 255 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC084851.1-201ENST00000529105 249 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 HSPE1P5-201ENST00000561489 272 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC007151.1-201ENST00000572774 483 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AL355365.1-201ENST00000616480 294 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AC006111.3-201ENST00000622137 383 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 AL031601.2-202ENST00000622650 282 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 MTND4LP32-201ENST00000636111 270 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 ZNF519P1-201ENST00000449011 1626 ntBASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCHD4Q6ZW05 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 ZNF826P-207ENST00000622273 1910 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 Y_RNA.33-201ENST00000362591 102 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 SNORA75B-201ENST00000384053 137 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 Y_RNA.480-201ENST00000384364 102 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-1297P-201ENST00000384415 104 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 SNORA70C-201ENST00000384538 135 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 RNA5SP424-201ENST00000390988 115 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 RNU6-1025P-201ENST00000410629 104 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 RN7SKP53-201ENST00000411337 315 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AL354751.2-201ENST00000415471 210 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AL158156.1-201ENST00000422509 473 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 RPL21P40-201ENST00000428586 483 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 SAR1AP4-201ENST00000429225 591 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 NDUFB1P1-201ENST00000435191 180 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 MTND1P17-201ENST00000448961 204 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 CECR9-201ENST00000453421 199 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC008716.1-201ENST00000511084 513 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 RN7SKP122-201ENST00000515923 296 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 RNA5SP164-201ENST00000516533 110 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC022695.1-201ENST00000522089 237 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AP005597.4-201ENST00000526762 229 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC120057.2-201ENST00000571520 271 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AL133393.1-201ENST00000603277 287 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC002076.2-201ENST00000617362 122 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC126177.8-201ENST00000618339 1015 ntBASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.39□□□□□ -1.87
PTCHD4Q6ZW05 AC007785.2-201ENST00000598627 1916 ntBASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PTCHD4Q6ZW05 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms