Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MIR3688-2-201ENST00000636963 87 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 CUL1P1-201ENST00000509510 2425 ntBASIC3.49□□□□□ -1.85
SYNE3Q6ZMZ3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AL359693.1-201ENST00000614959 2407 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 SNORA62.1-201ENST00000364287 154 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 Y_RNA.402-201ENST00000383972 102 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-908P-201ENST00000410160 94 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 RPS12P24-201ENST00000412619 387 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 HMGB1P27-201ENST00000431429 603 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 PIGFP3-201ENST00000441918 722 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AC073415.1-201ENST00000449240 153 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 CACYBPP2-201ENST00000453625 678 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AL121769.1-201ENST00000469473 401 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 RNA5SP341-201ENST00000516261 117 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-711P-201ENST00000517255 106 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AC109635.3-201ENST00000529536 185 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 HMGB1P14-201ENST00000557424 591 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AMZ2P1-203ENST00000565833 850 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 MIR4703-201ENST00000577728 79 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AC027309.3-201ENST00000623419 351 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AL353743.1-202ENST00000431724 1695 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 MTND5P19-201ENST00000424872 1794 ntBASIC3.48□□□□□ -1.85
SYNE3Q6ZMZ3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 GABRG2-229ENST00000641017 3628 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 RN7SKP58-201ENST00000411010 305 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC080125.1-201ENST00000414888 684 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 CALM2P2-201ENST00000428512 440 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AL591704.1-201ENST00000432574 275 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AL596276.1-201ENST00000434465 418 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 RPL7P54-201ENST00000438336 674 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 MTND1P18-201ENST00000448191 573 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 RPS29P2-201ENST00000479278 136 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 MTAPP1-201ENST00000489154 819 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 OR5AL2P-201ENST00000532185 920 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC034105.3-201ENST00000565294 442 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AP001094.1-201ENST00000579805 193 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC006504.3-201ENST00000586818 523 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC136601.2-201ENST00000604356 474 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC008536.2-201ENST00000607284 349 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AL359547.2-201ENST00000615810 418 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AL160394.1-201ENST00000624765 724 ntBASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SYNE3Q6ZMZ3 AC108206.1-201ENST00000570186 4159 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 UBE2L2-201ENST00000254302 429 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 Y_RNA.255-201ENST00000364581 97 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 Y_RNA.256-201ENST00000364594 104 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 RNU6-217P-201ENST00000384164 104 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 SNORA1.3-201ENST00000384676 136 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC092809.3-201ENST00000415453 231 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 ELOCP14-201ENST00000428070 331 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 ELOCP7-201ENST00000439968 331 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC233702.1-201ENST00000482905 502 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC092436.1-201ENST00000506450 503 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 RNA5SP503-201ENST00000517047 117 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 RNA5SP291-201ENST00000517222 105 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC027807.1-201ENST00000559921 996 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 AC010653.1-201ENST00000571108 881 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 SNORA59B-202ENST00000578183 701 ntBASIC3.46□□□□□ -1.86
SYNE3Q6ZMZ3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms