Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 SNORA7.4-201ENST00000384249 137 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 RNU6-39P-201ENST00000384344 107 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 RNU1-148P-201ENST00000384472 162 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 MIR23B-201ENST00000384832 97 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 MIR490-201ENST00000384865 128 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 MIR558-201ENST00000384920 94 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC063979.1-201ENST00000415539 377 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AL356583.2-201ENST00000426536 280 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 MED13P1-201ENST00000428342 171 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC004263.1-201ENST00000479327 332 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC011005.2-201ENST00000487324 359 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC068781.1-201ENST00000488231 618 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 RPS27P27-201ENST00000498779 255 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 FABP5P5-201ENST00000515537 406 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 PSMA2P1-201ENST00000526365 646 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 FAM92A1P1-201ENST00000528023 890 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 ZNF321P-202ENST00000550843 495 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 RPL21P12-201ENST00000559810 515 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC092354.1-201ENST00000606057 376 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 AC018692.3-201ENST00000623929 123 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 U6.105-201ENST00000637379 88 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KCNIP4Q6PIL6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 Y_RNA.22-201ENST00000362492 102 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 MIR183-201ENST00000384958 110 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 RPL23AP32-201ENST00000395315 459 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 RPS24P1-201ENST00000438550 371 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 USP9YP12-201ENST00000450481 570 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 FTH1P2-201ENST00000466086 412 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 RPL36AP48-201ENST00000485521 314 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 AC074250.1-201ENST00000511117 192 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 SMURF2P1-201ENST00000514992 481 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 Y_RNA.672-201ENST00000516289 104 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 RNA5SP82-201ENST00000516707 92 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 CBX3P7-201ENST00000532876 502 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 RPL21P5-201ENST00000554662 472 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 MYL12BP1-201ENST00000569826 507 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 BNIP3P33-201ENST00000598912 569 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 AC012409.4-201ENST00000612923 249 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 MIR7975-201ENST00000619350 68 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 AC012640.5-201ENST00000623897 319 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 MTND4P4-201ENST00000439033 1366 ntBASIC2.1□□□□□ -2.07
KCNIP4Q6PIL6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 MIR412-201ENST00000362142 91 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 RNU6-942P-201ENST00000363002 107 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 RNU6-553P-201ENST00000364047 96 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 AL031577.2-201ENST00000404133 280 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 FTH1P15-201ENST00000406984 280 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 Y_RNA.623-201ENST00000411128 95 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 AC127391.1-201ENST00000411737 98 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 AL365338.1-201ENST00000422282 858 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 MTND4P20-201ENST00000424125 869 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 AC007283.2-201ENST00000424739 197 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 AC119618.1-201ENST00000434191 222 ntBASIC2.09□□□□□ -2.07
KCNIP4Q6PIL6 AC124916.1-201ENST00000444020 547 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 254.6 ms