Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
E4F1Q66K89 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
E4F1Q66K89 RNU6-55P-201ENST00000411092 107 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.22□□□□□ -1.73
E4F1Q66K89 AC243428.1-201ENST00000421099 264 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 RPL18P10-201ENST00000425606 538 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.22□□□□□ -1.73
E4F1Q66K89 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.22□□□□□ -1.73
E4F1Q66K89 SNRPEP4-201ENST00000435815 279 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.22□□□□□ -1.73
E4F1Q66K89 NDUFS5P3-201ENST00000450668 321 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.22□□□□□ -1.73
E4F1Q66K89 AC015911.1-201ENST00000495111 156 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.22□□□□□ -1.73
E4F1Q66K89 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.22□□□□□ -1.73
E4F1Q66K89 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.22□□□□□ -1.73
E4F1Q66K89 AC123912.5-201ENST00000605470 343 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 AL355810.1-201ENST00000614629 552 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 AC087588.2-201ENST00000617667 426 ntBASIC4.22□□□□□ -1.73
E4F1Q66K89 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
E4F1Q66K89 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.22□□□□□ -1.73
E4F1Q66K89 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
E4F1Q66K89 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
E4F1Q66K89 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
E4F1Q66K89 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.21□□□□□ -1.74
E4F1Q66K89 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
E4F1Q66K89 RNU1-32P-201ENST00000363937 159 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 Y_RNA.245-201ENST00000364493 95 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 Y_RNA.557-201ENST00000384680 107 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AL030996.1-201ENST00000411430 235 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.21□□□□□ -1.74
E4F1Q66K89 AL356867.1-201ENST00000429623 299 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 USP9YP7-201ENST00000436723 430 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.21□□□□□ -1.74
E4F1Q66K89 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.21□□□□□ -1.74
E4F1Q66K89 USP9YP32-201ENST00000452432 430 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.21□□□□□ -1.74
E4F1Q66K89 RN7SL860P-201ENST00000473738 223 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AC068781.1-201ENST00000488231 618 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AL160314.1-201ENST00000490836 438 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
E4F1Q66K89 AC093840.1-201ENST00000511599 336 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
E4F1Q66K89 RNA5SP208-201ENST00000516156 78 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 RNA5SP290-201ENST00000517133 127 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AC084851.1-201ENST00000529105 249 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.21□□□□□ -1.74
E4F1Q66K89 MIR4738-201ENST00000579134 87 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 MIR4503-201ENST00000582187 83 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AC092447.9-201ENST00000603395 144 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AC091167.4-201ENST00000605079 184 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AC110741.2-201ENST00000605278 268 ntBASIC4.21□□□□□ -1.74
E4F1Q66K89 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.21□□□□□ -1.74
E4F1Q66K89 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.21□□□□□ -1.74
E4F1Q66K89 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
E4F1Q66K89 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
E4F1Q66K89 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
E4F1Q66K89 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
E4F1Q66K89 AC073073.2-201ENST00000609827 2578 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
E4F1Q66K89 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
E4F1Q66K89 RNU6-283P-201ENST00000364788 107 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 RNU6-933P-201ENST00000384424 107 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 MIR568-201ENST00000385036 95 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.2□□□□□ -1.74
E4F1Q66K89 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
E4F1Q66K89 AC006946.1-201ENST00000429106 328 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.2□□□□□ -1.74
E4F1Q66K89 AC096644.2-201ENST00000429278 159 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
E4F1Q66K89 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.2□□□□□ -1.74
E4F1Q66K89 RPS23P3-201ENST00000470993 430 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 RPS20P22-201ENST00000473700 357 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.2□□□□□ -1.74
E4F1Q66K89 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.2□□□□□ -1.74
E4F1Q66K89 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.2□□□□□ -1.74
E4F1Q66K89 RNU6-1073P-201ENST00000517182 106 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.2□□□□□ -1.74
E4F1Q66K89 AC004024.1-201ENST00000549244 247 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.2□□□□□ -1.74
E4F1Q66K89 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.2□□□□□ -1.74
E4F1Q66K89 IPO5P1-202ENST00000600039 287 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 AL121917.1-203ENST00000605534 577 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.2□□□□□ -1.74
E4F1Q66K89 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.2□□□□□ -1.74
E4F1Q66K89 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.2□□□□□ -1.74
E4F1Q66K89 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
E4F1Q66K89 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.2□□□□□ -1.74
E4F1Q66K89 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.2□□□□□ -1.74
E4F1Q66K89 AL136964.1-201ENST00000622038 2990 ntBASIC4.2□□□□□ -1.74
E4F1Q66K89 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.19□□□□□ -1.74
E4F1Q66K89 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
E4F1Q66K89 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.19□□□□□ -1.74
E4F1Q66K89 RNU6-325P-201ENST00000411132 105 ntBASIC4.19□□□□□ -1.74
E4F1Q66K89 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.19□□□□□ -1.74
E4F1Q66K89 Z85995.1-201ENST00000415547 335 ntBASIC4.19□□□□□ -1.74
E4F1Q66K89 AC245028.1-201ENST00000423259 256 ntBASIC4.19□□□□□ -1.74
E4F1Q66K89 MRPS18CP6-201ENST00000423587 223 ntBASIC4.19□□□□□ -1.74
E4F1Q66K89 BX276092.3-201ENST00000424182 230 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms