Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MIR4667-201ENST00000578933 66 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 BNIP3P25-201ENST00000596023 559 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 AC087821.2-201ENST00000637086 450 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 SNORA8-201ENST00000384574 139 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 RNU6-700P-201ENST00000391043 107 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 AC118273.2-201ENST00000532092 465 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 AC019288.1-201ENST00000557918 224 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 MTND4LP24-201ENST00000572277 291 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 MIR5589-201ENST00000579442 60 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 MIR4723-201ENST00000585070 81 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 AL450336.1-201ENST00000605180 586 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 AC073111.2-201ENST00000605657 1075 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 AC009974.1-201ENST00000608881 455 ntBASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.22□□□□□ -2.37
VPS13DQ5THJ4 AC100821.1-201ENST00000523153 2479 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 RNU6-185P-201ENST00000384421 107 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AL513343.1-201ENST00000451818 792 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 OR52A4P-202ENST00000481634 799 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 RPL21P136-201ENST00000605378 396 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AC017083.3-201ENST00000609955 700 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 Y_RNA.167-201ENST00000363735 109 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AC010627.1-201ENST00000503819 1294 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AC021171.1-201ENST00000603137 706 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AL357075.2-201ENST00000614906 189 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 Y_RNA.610-201ENST00000410681 103 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AC114737.2-201ENST00000421583 173 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AC133963.2-201ENST00000513686 578 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AL669831.4-202ENST00000590817 238 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 MTCO2P22-201ENST00000603246 681 ntBASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.21□□□□□ -2.38
VPS13DQ5THJ4 MIR1250-201ENST00000408098 113 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 NDUFB4P7-201ENST00000423198 363 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AL035410.1-201ENST00000427409 427 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AC091489.2-201ENST00000566263 604 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 FAM60CP-201ENST00000591086 664 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AC009509.4-201ENST00000619202 509 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 RNU1-124P-201ENST00000363861 145 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 MIR32-201ENST00000384965 70 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AL158823.1-201ENST00000418441 478 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AC087879.1-201ENST00000474343 374 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AC022202.1-201ENST00000613515 211 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 U8.7-201ENST00000364940 136 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 PIGPP2-201ENST00000411569 458 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 DDX3P2-201ENST00000446138 111 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AC006213.5-201ENST00000619673 288 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 MIR7515-201ENST00000637837 67 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AL022718.1-201ENST00000412004 84 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 RPEP5-201ENST00000441137 268 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 RNU7-157P-201ENST00000459600 66 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AC138853.1-201ENST00000503549 823 ntBASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.2□□□□□ -2.38
VPS13DQ5THJ4 U3.8-201ENST00000363675 217 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 SNORA8.3-201ENST00000384679 139 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AC083875.1-201ENST00000419509 405 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 RPL36AP53-201ENST00000432891 316 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AP003717.3-201ENST00000544832 1180 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AL355816.1-201ENST00000607951 118 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 MTND2P13-201ENST00000577438 1039 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AC084824.5-201ENST00000612009 413 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 AC025588.4-201ENST00000615802 908 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 RNU1-23P-201ENST00000363361 144 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 Y_RNA.170-201ENST00000363746 110 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 SNORA4.3-201ENST00000365564 137 ntBASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
VPS13DQ5THJ4 MIR1265-201ENST00000408444 86 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms