Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 NDUFB1P2-201ENST00000449477 176 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.3□□□□□ -1.72
SSRP1Q08945 RPL21P13-201ENST00000488305 481 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.3□□□□□ -1.72
SSRP1Q08945 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.3□□□□□ -1.72
SSRP1Q08945 AP005597.4-201ENST00000526762 229 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 AL442663.2-201ENST00000554385 511 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 ANP32BP3-201ENST00000559213 706 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 RNU6-85P-201ENST00000605989 107 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 RNU1-30P-201ENST00000606575 163 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 AL133215.3-201ENST00000609801 448 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 AC010378.1-201ENST00000619270 362 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 AC048347.1-201ENST00000624621 427 ntBASIC4.3□□□□□ -1.72
SSRP1Q08945 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.3□□□□□ -1.72
SSRP1Q08945 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSRP1Q08945 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.3□□□□□ -1.72
SSRP1Q08945 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
SSRP1Q08945 RNU6-593P-201ENST00000364716 112 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 MIR134-201ENST00000385258 73 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 MTCYBP4-201ENST00000401524 249 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 RNU2-37P-201ENST00000410695 177 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 AL590632.1-201ENST00000424289 371 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 UBE2D3P2-201ENST00000424409 445 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 AC005534.2-201ENST00000431047 433 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 NDUFB1P1-201ENST00000435191 180 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.29□□□□□ -1.72
SSRP1Q08945 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.29□□□□□ -1.72
SSRP1Q08945 HMGN2P16-201ENST00000456802 261 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 AL135752.1-201ENST00000479477 471 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSRP1Q08945 AC096745.1-201ENST00000509945 370 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 AC025755.1-201ENST00000521306 278 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 CASP1P1-201ENST00000526345 212 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 APOOP3-201ENST00000536787 586 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.29□□□□□ -1.72
SSRP1Q08945 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.29□□□□□ -1.72
SSRP1Q08945 AC064836.2-201ENST00000609491 462 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 ATP5A1P2-202ENST00000616464 443 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 AC099506.2-201ENST00000623074 221 ntBASIC4.29□□□□□ -1.72
SSRP1Q08945 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSRP1Q08945 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSRP1Q08945 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.29□□□□□ -1.72
SSRP1Q08945 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSRP1Q08945 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
SSRP1Q08945 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSRP1Q08945 AC118273.1-201ENST00000525324 3006 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSRP1Q08945 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSRP1Q08945 RNU6-601P-201ENST00000384540 107 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 RNU6-140P-201ENST00000384566 108 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 SNORA57.3-201ENST00000411095 141 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 Y_RNA.623-201ENST00000411128 95 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 AL592148.1-201ENST00000413568 445 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 ATG3P1-201ENST00000419507 911 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 RPS15AP6-201ENST00000420703 385 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 UBE2V1P4-201ENST00000425374 344 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 RPL7P28-201ENST00000437739 740 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.28□□□□□ -1.72
SSRP1Q08945 RPS23P3-201ENST00000470993 430 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 AC139453.3-201ENST00000493276 369 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 AC146944.2-203ENST00000502493 354 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 AC139495.1-202ENST00000513164 354 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 RN7SKP13-201ENST00000515933 244 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 RNU6-1170P-201ENST00000515974 106 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.28□□□□□ -1.72
SSRP1Q08945 OR1M4P-201ENST00000589199 287 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 AC007938.3-201ENST00000604965 623 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 AC084781.2-201ENST00000615568 161 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 AC004825.2-201ENST00000616634 455 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 AP000553.6-201ENST00000641242 118 ntBASIC4.28□□□□□ -1.72
SSRP1Q08945 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.28□□□□□ -1.72
SSRP1Q08945 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.28□□□□□ -1.72
SSRP1Q08945 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.28□□□□□ -1.72
SSRP1Q08945 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.28□□□□□ -1.72
SSRP1Q08945 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSRP1Q08945 AC022336.2-201ENST00000568966 2538 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.27□□□□□ -1.73
SSRP1Q08945 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSRP1Q08945 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSRP1Q08945 SNORA63-201ENST00000363450 132 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 SNORD14B-201ENST00000364533 90 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 RNU6-384P-201ENST00000364900 104 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 RNU6-95P-201ENST00000384697 107 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 MIR23B-201ENST00000384832 97 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 SNORA40C-201ENST00000391285 128 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 RNU6-954P-201ENST00000411355 107 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 AL627311.1-201ENST00000431514 115 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 ANP32BP2-201ENST00000454525 545 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 AL583843.1-201ENST00000456070 346 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.27□□□□□ -1.73
SSRP1Q08945 HMGB3P15-201ENST00000507326 574 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.27□□□□□ -1.73
SSRP1Q08945 RNA5SP309-201ENST00000516670 106 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 SNORA31.19-201ENST00000517079 126 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.27□□□□□ -1.73
SSRP1Q08945 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.27□□□□□ -1.73
SSRP1Q08945 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SSRP1Q08945 AL121821.2-201ENST00000556081 394 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 AC093249.1-201ENST00000567049 203 ntBASIC4.27□□□□□ -1.73
SSRP1Q08945 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms