Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.63□□□□□ -1.99
SCN1BQ07699 AL365338.1-201ENST00000422282 858 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AL159987.2-201ENST00000432754 307 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AL353706.1-201ENST00000436728 494 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 RPS15AP9-201ENST00000439856 381 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 PRSS3P4-201ENST00000453323 162 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AL672167.3-201ENST00000465951 960 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AC126389.1-201ENST00000477436 290 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.63□□□□□ -1.99
SCN1BQ07699 AC008716.1-201ENST00000511084 513 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 RNA5SP112-201ENST00000515937 99 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 RANP3-201ENST00000530970 276 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.63□□□□□ -1.99
SCN1BQ07699 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.63□□□□□ -1.99
SCN1BQ07699 AC092325.1-201ENST00000566449 554 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AC105245.1-201ENST00000581934 244 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AC098848.2-201ENST00000588023 330 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 Z99497.2-201ENST00000603634 310 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.63□□□□□ -1.99
SCN1BQ07699 AC138649.3-201ENST00000622154 254 ntBASIC2.63□□□□□ -1.99
SCN1BQ07699 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SCN1BQ07699 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
SCN1BQ07699 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SCN1BQ07699 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
SCN1BQ07699 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.62□□□□□ -1.99
SCN1BQ07699 RNU6-486P-201ENST00000363116 107 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SCN1BQ07699 SNORD67-201ENST00000390833 111 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 FTH1P15-201ENST00000406984 280 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN1BQ07699 MTND3P17-201ENST00000416968 344 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 BX295541.1-201ENST00000417774 250 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 C1DP2-201ENST00000418167 426 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN1BQ07699 BX276092.3-201ENST00000424182 230 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 MTCO3P30-201ENST00000426425 670 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.62□□□□□ -1.99
SCN1BQ07699 GPR143P-201ENST00000434155 205 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN1BQ07699 AC098826.2-201ENST00000452011 651 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN1BQ07699 AP000705.1-201ENST00000454567 350 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 RN7SL863P-201ENST00000462370 296 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN1BQ07699 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN1BQ07699 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN1BQ07699 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN1BQ07699 AC109329.2-201ENST00000519658 482 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.62□□□□□ -1.99
SCN1BQ07699 PSMA2P1-201ENST00000526365 646 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.62□□□□□ -1.99
SCN1BQ07699 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.62□□□□□ -1.99
SCN1BQ07699 AC069294.1-201ENST00000608397 350 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 AC010378.1-201ENST00000619270 362 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 AL359740.1-201ENST00000624340 592 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 AC097520.1-201ENST00000624435 385 ntBASIC2.62□□□□□ -1.99
SCN1BQ07699 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.62□□□□□ -1.99
SCN1BQ07699 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SCN1BQ07699 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN1BQ07699 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SCN1BQ07699 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SCN1BQ07699 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SCN1BQ07699 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SCN1BQ07699 RNU6-858P-201ENST00000362436 107 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 SNORD14B-201ENST00000364533 90 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 RNU6-1179P-201ENST00000384667 107 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 MIR592-201ENST00000384959 97 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 MIR449B-201ENST00000384995 97 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 MIR10A-201ENST00000385043 110 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 CIR1P3-201ENST00000405137 479 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 EEF1A1P40-201ENST00000412883 573 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN1BQ07699 AC244505.5-201ENST00000443639 207 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AC079781.2-201ENST00000446424 169 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN1BQ07699 MTND1P27-201ENST00000451117 902 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN1BQ07699 snoU109.2-201ENST00000459316 135 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 RPL36AP48-201ENST00000485521 314 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 MRPL42P6-201ENST00000486397 371 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN1BQ07699 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
SCN1BQ07699 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.61□□□□□ -1.99
SCN1BQ07699 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN1BQ07699 SMURF2P1-201ENST00000514992 481 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 Y_RNA.695-201ENST00000516715 107 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 OR5AL2P-201ENST00000532185 920 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN1BQ07699 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN1BQ07699 AC234778.2-201ENST00000566241 354 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 UBL5P2-201ENST00000583788 219 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AC040904.1-201ENST00000590850 223 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AL670379.10-201ENST00000604330 253 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AL670379.9-201ENST00000605428 253 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 OR2AS2P-201ENST00000606902 342 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AC090115.4-201ENST00000609970 188 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AC100793.4-201ENST00000613683 429 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AC018692.3-201ENST00000623929 123 ntBASIC2.61□□□□□ -1.99
SCN1BQ07699 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.61□□□□□ -1.99
SCN1BQ07699 U6.105-201ENST00000637379 88 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms