Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.31□□□□□ -2.36
HSPG2P98160 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.31□□□□□ -2.36
HSPG2P98160 AGGF1P5-201ENST00000567900 919 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.31□□□□□ -2.36
HSPG2P98160 AL391834.1-201ENST00000609609 560 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AL133384.1-201ENST00000412744 351 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 RPL30P13-201ENST00000418873 348 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 OR51AB1P-201ENST00000429046 620 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.31□□□□□ -2.36
HSPG2P98160 SYPL1P1-201ENST00000473622 768 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.31□□□□□ -2.36
HSPG2P98160 AC010329.5-201ENST00000623497 2174 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 SNORA16B-201ENST00000364674 135 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 RPS3AP24-201ENST00000407896 734 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.31□□□□□ -2.36
HSPG2P98160 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AC241584.1-201ENST00000438469 1241 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.31□□□□□ -2.36
HSPG2P98160 SNORA31.8-201ENST00000516327 108 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AC010186.2-204ENST00000537668 439 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.31□□□□□ -2.36
HSPG2P98160 HSPE1P7-201ENST00000604681 321 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 MIR7515-201ENST00000637837 67 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.31□□□□□ -2.36
HSPG2P98160 TPTE2P4-201ENST00000258589 1605 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 SNORD26-201ENST00000384147 75 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AL589994.1-201ENST00000404962 340 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 RNU6-272P-201ENST00000411028 104 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.31□□□□□ -2.36
HSPG2P98160 RNA5SP67-201ENST00000516422 131 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AP003717.3-201ENST00000544832 1180 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.31□□□□□ -2.36
HSPG2P98160 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.31□□□□□ -2.36
HSPG2P98160 AC004852.3-201ENST00000614131 326 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 AC099842.1-201ENST00000619919 596 ntBASIC0.31□□□□□ -2.36
HSPG2P98160 Z77249.1-201ENST00000444622 1175 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
HSPG2P98160 RNU7-23P-201ENST00000459465 62 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.3□□□□□ -2.36
HSPG2P98160 VN1R81P-201ENST00000602085 372 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 AL355810.1-201ENST00000614629 552 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 AC025588.4-201ENST00000615802 908 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 AL121890.5-201ENST00000620848 304 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 AP000776.1-201ENST00000530032 1663 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 RN7SKP158-201ENST00000410453 326 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 OR9R1P-201ENST00000412200 877 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 MRPL35P3-201ENST00000421557 364 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 RABEPKP1-201ENST00000440529 1026 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 AC087879.1-201ENST00000474343 374 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.3□□□□□ -2.36
HSPG2P98160 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.3□□□□□ -2.36
HSPG2P98160 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.3□□□□□ -2.36
HSPG2P98160 Y_RNA.757-201ENST00000578934 114 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 ELOCP5-201ENST00000604924 333 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 PRR13P7-201ENST00000605538 430 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.3□□□□□ -2.36
HSPG2P98160 AC015726.3-201ENST00000624501 418 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 RNA5SP391-201ENST00000363456 119 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 SNORA8.3-201ENST00000384679 139 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 MIR618-201ENST00000385287 98 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 AL138880.1-201ENST00000405824 642 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.3□□□□□ -2.36
HSPG2P98160 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.3□□□□□ -2.36
HSPG2P98160 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.3□□□□□ -2.36
HSPG2P98160 AP001269.3-201ENST00000588718 329 ntBASIC0.3□□□□□ -2.36
HSPG2P98160 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.3□□□□□ -2.36
HSPG2P98160 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.3□□□□□ -2.36
HSPG2P98160 MIR126-201ENST00000362291 85 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.29□□□□□ -2.36
HSPG2P98160 AC098614.2-201ENST00000426040 255 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.29□□□□□ -2.36
HSPG2P98160 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.29□□□□□ -2.36
HSPG2P98160 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
HSPG2P98160 RNU6-629P-201ENST00000384061 103 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.29□□□□□ -2.36
HSPG2P98160 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.29□□□□□ -2.36
HSPG2P98160 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.29□□□□□ -2.36
HSPG2P98160 SNRPGP6-201ENST00000451124 220 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 BX248409.1-201ENST00000455497 255 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 EIF4EP3-201ENST00000498782 656 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 MTCYBP16-201ENST00000509187 1129 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AC025857.1-201ENST00000525252 377 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.29□□□□□ -2.36
HSPG2P98160 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.29□□□□□ -2.36
HSPG2P98160 AC136932.1-201ENST00000574771 208 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AC012676.2-201ENST00000619258 186 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AL360181.4-201ENST00000621752 134 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
HSPG2P98160 MIR493-201ENST00000385254 89 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 U3.29-201ENST00000391296 212 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 ELOCP11-201ENST00000436690 332 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 HSPE1P21-201ENST00000438283 308 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 SNRPEP7-201ENST00000438350 220 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 ELOCP16-201ENST00000444494 332 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AL358794.1-201ENST00000445689 381 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.29□□□□□ -2.36
HSPG2P98160 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.29□□□□□ -2.36
HSPG2P98160 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.29□□□□□ -2.36
HSPG2P98160 SCARNA11.3-201ENST00000517276 130 ntBASIC0.29□□□□□ -2.36
HSPG2P98160 AC073111.2-201ENST00000605657 1075 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms