Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
YBX1P67809 AC005951.2-201ENST00000576282 495 ntBASIC4.14□□□□□ -1.75
YBX1P67809 BDH2P1-201ENST00000602288 736 ntBASIC4.14□□□□□ -1.75
YBX1P67809 ARF4P1-201ENST00000605447 541 ntBASIC4.14□□□□□ -1.75
YBX1P67809 MIR432-201ENST00000606207 94 ntBASIC4.14□□□□□ -1.75
YBX1P67809 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.14□□□□□ -1.75
YBX1P67809 FTX_2.1-201ENST00000618816 94 ntBASIC4.14□□□□□ -1.75
YBX1P67809 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.14□□□□□ -1.75
YBX1P67809 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.14□□□□□ -1.75
YBX1P67809 AC139713.2-215ENST00000641428 5037 ntBASIC4.14□□□□□ -1.75
YBX1P67809 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.14□□□□□ -1.75
YBX1P67809 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
YBX1P67809 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
YBX1P67809 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
YBX1P67809 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
YBX1P67809 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
YBX1P67809 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
YBX1P67809 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
YBX1P67809 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
YBX1P67809 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
YBX1P67809 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.13□□□□□ -1.75
YBX1P67809 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
YBX1P67809 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.13□□□□□ -1.75
YBX1P67809 RPL9P7-201ENST00000330965 580 ntBASIC4.13□□□□□ -1.75
YBX1P67809 Y_RNA.84-201ENST00000363011 104 ntBASIC4.13□□□□□ -1.75
YBX1P67809 RNU6-774P-201ENST00000363238 107 ntBASIC4.13□□□□□ -1.75
YBX1P67809 Y_RNA.180-201ENST00000363867 113 ntBASIC4.13□□□□□ -1.75
YBX1P67809 RNU6-280P-201ENST00000364145 104 ntBASIC4.13□□□□□ -1.75
YBX1P67809 RNU6-1317P-201ENST00000364582 104 ntBASIC4.13□□□□□ -1.75
YBX1P67809 U3.15-201ENST00000365398 212 ntBASIC4.13□□□□□ -1.75
YBX1P67809 U8.8-201ENST00000365399 135 ntBASIC4.13□□□□□ -1.75
YBX1P67809 RNU6-708P-201ENST00000384217 107 ntBASIC4.13□□□□□ -1.75
YBX1P67809 Y_RNA.534-201ENST00000384599 112 ntBASIC4.13□□□□□ -1.75
YBX1P67809 Y_RNA.539-201ENST00000384635 107 ntBASIC4.13□□□□□ -1.75
YBX1P67809 MIR521-1-201ENST00000384902 87 ntBASIC4.13□□□□□ -1.75
YBX1P67809 MIR134-201ENST00000385258 73 ntBASIC4.13□□□□□ -1.75
YBX1P67809 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
YBX1P67809 RNU6-1203P-201ENST00000410703 110 ntBASIC4.13□□□□□ -1.75
YBX1P67809 AL353621.1-201ENST00000418219 243 ntBASIC4.13□□□□□ -1.75
YBX1P67809 MYL8P-204ENST00000431574 518 ntBASIC4.13□□□□□ -1.75
YBX1P67809 AL513043.1-201ENST00000439124 535 ntBASIC4.13□□□□□ -1.75
YBX1P67809 RPEP5-201ENST00000441137 268 ntBASIC4.13□□□□□ -1.75
YBX1P67809 AL392103.1-201ENST00000447000 198 ntBASIC4.13□□□□□ -1.75
YBX1P67809 NDUFB1P2-201ENST00000449477 176 ntBASIC4.13□□□□□ -1.75
YBX1P67809 RNU6-1037P-201ENST00000459571 107 ntBASIC4.13□□□□□ -1.75
YBX1P67809 RPL9P9-202ENST00000466501 579 ntBASIC4.13□□□□□ -1.75
YBX1P67809 RN7SL812P-201ENST00000493791 279 ntBASIC4.13□□□□□ -1.75
YBX1P67809 AC108145.1-201ENST00000503770 153 ntBASIC4.13□□□□□ -1.75
YBX1P67809 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.13□□□□□ -1.75
YBX1P67809 AC008716.1-201ENST00000511084 513 ntBASIC4.13□□□□□ -1.75
YBX1P67809 AC006499.6-201ENST00000511169 607 ntBASIC4.13□□□□□ -1.75
YBX1P67809 RNA5SP360-201ENST00000516555 118 ntBASIC4.13□□□□□ -1.75
YBX1P67809 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.13□□□□□ -1.75
YBX1P67809 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.13□□□□□ -1.75
YBX1P67809 AC130289.1-201ENST00000577321 73 ntBASIC4.13□□□□□ -1.75
YBX1P67809 AC123912.5-201ENST00000605470 343 ntBASIC4.13□□□□□ -1.75
YBX1P67809 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
YBX1P67809 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
YBX1P67809 ZNF299P-201ENST00000406845 1804 ntBASIC4.13□□□□□ -1.75
YBX1P67809 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
YBX1P67809 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
YBX1P67809 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.13□□□□□ -1.75
YBX1P67809 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
YBX1P67809 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
YBX1P67809 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.13□□□□□ -1.75
YBX1P67809 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
YBX1P67809 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
YBX1P67809 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.12□□□□□ -1.75
YBX1P67809 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.12□□□□□ -1.75
YBX1P67809 SCN1A-220ENST00000641603 12506 ntBASIC4.12□□□□□ -1.75
YBX1P67809 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.12□□□□□ -1.75
YBX1P67809 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
YBX1P67809 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.12□□□□□ -1.75
YBX1P67809 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 AL592182.3-201ENST00000642132 3304 ntBASIC4.12□□□□□ -1.75
YBX1P67809 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.12□□□□□ -1.75
YBX1P67809 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
YBX1P67809 RNU1-14P-201ENST00000362759 152 ntBASIC4.12□□□□□ -1.75
YBX1P67809 Y_RNA.65-201ENST00000362846 100 ntBASIC4.12□□□□□ -1.75
YBX1P67809 RNU1-76P-201ENST00000362903 159 ntBASIC4.12□□□□□ -1.75
YBX1P67809 SNORD74.4-201ENST00000364129 80 ntBASIC4.12□□□□□ -1.75
YBX1P67809 Y_RNA.297-201ENST00000364950 91 ntBASIC4.12□□□□□ -1.75
YBX1P67809 RNU6-76P-201ENST00000384060 104 ntBASIC4.12□□□□□ -1.75
YBX1P67809 SNORA37-201ENST00000384504 129 ntBASIC4.12□□□□□ -1.75
YBX1P67809 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
YBX1P67809 Y_RNA.592-201ENST00000410274 109 ntBASIC4.12□□□□□ -1.75
YBX1P67809 RNU2-33P-201ENST00000410344 192 ntBASIC4.12□□□□□ -1.75
YBX1P67809 RNU2-14P-201ENST00000411053 191 ntBASIC4.12□□□□□ -1.75
YBX1P67809 RNU6-130P-201ENST00000411112 103 ntBASIC4.12□□□□□ -1.75
YBX1P67809 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.12□□□□□ -1.75
YBX1P67809 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.12□□□□□ -1.75
YBX1P67809 RPS12P23-201ENST00000419579 400 ntBASIC4.12□□□□□ -1.75
YBX1P67809 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.12□□□□□ -1.75
YBX1P67809 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.12□□□□□ -1.75
YBX1P67809 AC096920.1-201ENST00000423991 241 ntBASIC4.12□□□□□ -1.75
YBX1P67809 AL159987.2-201ENST00000432754 307 ntBASIC4.12□□□□□ -1.75
YBX1P67809 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms