Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MTND5P10-201ENST00000603719 1809 ntBASIC4.21□□□□□ -1.74
HERVK_113P62684 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HERVK_113P62684 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HERVK_113P62684 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
HERVK_113P62684 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.2□□□□□ -1.74
HERVK_113P62684 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HERVK_113P62684 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HERVK_113P62684 Y_RNA.135-201ENST00000363439 95 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AL360182.1-201ENST00000397433 468 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.2□□□□□ -1.74
HERVK_113P62684 AL391417.1-201ENST00000404100 426 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AL139397.2-201ENST00000404529 772 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 RPL31P12-201ENST00000422587 358 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.2□□□□□ -1.74
HERVK_113P62684 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 MTCO3P10-201ENST00000455912 772 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 RPL21P10-201ENST00000463521 490 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AC087884.1-201ENST00000469738 328 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 TRBV12-2-201ENST00000489763 344 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.2□□□□□ -1.74
HERVK_113P62684 AC104136.1-201ENST00000512969 394 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AP004371.1-201ENST00000525240 214 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.2□□□□□ -1.74
HERVK_113P62684 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.2□□□□□ -1.74
HERVK_113P62684 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.2□□□□□ -1.74
HERVK_113P62684 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.2□□□□□ -1.74
HERVK_113P62684 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.2□□□□□ -1.74
HERVK_113P62684 FAM60BP-201ENST00000578364 658 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.2□□□□□ -1.74
HERVK_113P62684 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.2□□□□□ -1.74
HERVK_113P62684 CYP2C61P-201ENST00000604072 290 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 MIR7851-201ENST00000610611 160 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AL157817.1-201ENST00000614264 790 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AC133104.2-201ENST00000615272 193 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 AC022418.1-201ENST00000624118 445 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.2□□□□□ -1.74
HERVK_113P62684 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HERVK_113P62684 AC009812.4-201ENST00000569134 1805 ntBASIC4.2□□□□□ -1.74
HERVK_113P62684 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HERVK_113P62684 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HERVK_113P62684 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HERVK_113P62684 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HERVK_113P62684 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
HERVK_113P62684 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
HERVK_113P62684 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HERVK_113P62684 Y_RNA.31-201ENST00000362574 102 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 RNU6-173P-201ENST00000364215 104 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 SNORA22B-201ENST00000383876 138 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 RNU6-629P-201ENST00000384061 103 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 SNORA36C-201ENST00000384289 132 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 RNU6-45P-201ENST00000384471 107 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 HLFP1-201ENST00000402375 499 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 RNA5SP239-201ENST00000410218 129 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 RNA5SP120-201ENST00000410900 112 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 RNU6-954P-201ENST00000411355 107 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.19□□□□□ -1.74
HERVK_113P62684 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.19□□□□□ -1.74
HERVK_113P62684 AL590632.1-201ENST00000424289 371 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 MTCO1P39-201ENST00000426148 480 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 RPL7P28-201ENST00000437739 740 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 AC115115.1-201ENST00000449927 248 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.19□□□□□ -1.74
HERVK_113P62684 HMGB3P30-201ENST00000457863 606 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 MIR2053-201ENST00000459295 91 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 RPL37P6-201ENST00000460682 294 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.19□□□□□ -1.74
HERVK_113P62684 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.19□□□□□ -1.74
HERVK_113P62684 AL049874.1-201ENST00000489560 388 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 SNORA31.3-201ENST00000516029 96 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.19□□□□□ -1.74
HERVK_113P62684 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.19□□□□□ -1.74
HERVK_113P62684 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.19□□□□□ -1.74
HERVK_113P62684 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HERVK_113P62684 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.19□□□□□ -1.74
HERVK_113P62684 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.19□□□□□ -1.74
HERVK_113P62684 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HERVK_113P62684 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HERVK_113P62684 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HERVK_113P62684 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.19□□□□□ -1.74
HERVK_113P62684 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HERVK_113P62684 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HERVK_113P62684 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HERVK_113P62684 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
HERVK_113P62684 MTND5P19-201ENST00000424872 1794 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HERVK_113P62684 Y_RNA.395-201ENST00000383945 109 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 RNU6-128P-201ENST00000383976 107 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 RPL21P90-201ENST00000415692 466 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 DBIP2-201ENST00000419076 262 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.18□□□□□ -1.74
HERVK_113P62684 AC005326.1-201ENST00000429197 123 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 RPL23AP69-201ENST00000431134 458 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 RPS6P12-201ENST00000432491 726 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 HMGN2P21-201ENST00000447764 270 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 HSPE1P6-201ENST00000479457 291 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 SNORA31.20-201ENST00000517111 133 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.18□□□□□ -1.74
HERVK_113P62684 CYCSP27-201ENST00000527643 293 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.18□□□□□ -1.74
HERVK_113P62684 AC025423.5-201ENST00000550230 219 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms