Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.72□□□□□ -2.13
RAB38P57729 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB38P57729 ANP32BP3-201ENST00000559213 706 ntBASIC1.72□□□□□ -2.13
RAB38P57729 AC090079.2-201ENST00000575289 768 ntBASIC1.72□□□□□ -2.13
RAB38P57729 MIR3126-201ENST00000577443 74 ntBASIC1.72□□□□□ -2.13
RAB38P57729 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
RAB38P57729 AL158827.2-201ENST00000602494 330 ntBASIC1.72□□□□□ -2.13
RAB38P57729 AF129408.1-201ENST00000608767 431 ntBASIC1.72□□□□□ -2.13
RAB38P57729 AC131235.4-201ENST00000609288 620 ntBASIC1.72□□□□□ -2.13
RAB38P57729 AC092574.1-201ENST00000609771 420 ntBASIC1.72□□□□□ -2.13
RAB38P57729 AC245297.2-201ENST00000610119 565 ntBASIC1.72□□□□□ -2.13
RAB38P57729 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.72□□□□□ -2.13
RAB38P57729 AL691447.3-201ENST00000635020 330 ntBASIC1.72□□□□□ -2.13
RAB38P57729 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.72□□□□□ -2.13
RAB38P57729 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
RAB38P57729 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AL356292.1-201ENST00000283110 373 ntBASIC1.71□□□□□ -2.14
RAB38P57729 RNU6-413P-201ENST00000384115 107 ntBASIC1.71□□□□□ -2.14
RAB38P57729 Y_RNA.472-201ENST00000384322 102 ntBASIC1.71□□□□□ -2.14
RAB38P57729 MIR19A-201ENST00000384878 82 ntBASIC1.71□□□□□ -2.14
RAB38P57729 SUMO2P12-201ENST00000405924 140 ntBASIC1.71□□□□□ -2.14
RAB38P57729 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.71□□□□□ -2.14
RAB38P57729 USP9YP33-201ENST00000412220 421 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.71□□□□□ -2.14
RAB38P57729 EDDM3CP-201ENST00000415977 425 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.71□□□□□ -2.14
RAB38P57729 AC104651.1-201ENST00000427559 735 ntBASIC1.71□□□□□ -2.14
RAB38P57729 USP9YP35-201ENST00000435696 412 ntBASIC1.71□□□□□ -2.14
RAB38P57729 RPL7P12-201ENST00000446719 750 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AC092001.1-201ENST00000453012 261 ntBASIC1.71□□□□□ -2.14
RAB38P57729 RPL21P134-201ENST00000453468 483 ntBASIC1.71□□□□□ -2.14
RAB38P57729 USP9YP10-201ENST00000454868 628 ntBASIC1.71□□□□□ -2.14
RAB38P57729 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.71□□□□□ -2.14
RAB38P57729 RPL23AP42-201ENST00000471152 471 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AC107032.1-201ENST00000485945 480 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AC108729.1-201ENST00000487812 947 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AC079395.1-201ENST00000510981 262 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.71□□□□□ -2.14
RAB38P57729 SNORA25.11-201ENST00000515935 105 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.71□□□□□ -2.14
RAB38P57729 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RAB38P57729 MIR4298-201ENST00000584380 73 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AC008749.1-201ENST00000597650 306 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AL355297.2-201ENST00000604792 129 ntBASIC1.71□□□□□ -2.14
RAB38P57729 AC007038.2-201ENST00000608095 740 ntBASIC1.71□□□□□ -2.14
RAB38P57729 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RAB38P57729 MTND5P33-201ENST00000571250 1450 ntBASIC1.7□□□□□ -2.14
RAB38P57729 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
RAB38P57729 MIR1289-2-201ENST00000408360 111 ntBASIC1.7□□□□□ -2.14
RAB38P57729 MIR320C1-201ENST00000408566 88 ntBASIC1.7□□□□□ -2.14
RAB38P57729 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
RAB38P57729 RN7SKP284-201ENST00000411002 343 ntBASIC1.7□□□□□ -2.14
RAB38P57729 ZNF90P2-204ENST00000419323 1075 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AC097463.2-201ENST00000421074 142 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB38P57729 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB38P57729 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.7□□□□□ -2.14
RAB38P57729 AC007327.1-201ENST00000447461 264 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AL354685.2-201ENST00000448218 1447 ntBASIC1.7□□□□□ -2.14
RAB38P57729 MTCO1P27-201ENST00000448269 226 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AL441985.1-201ENST00000457727 251 ntBASIC1.7□□□□□ -2.14
RAB38P57729 RNU7-59P-201ENST00000459101 61 ntBASIC1.7□□□□□ -2.14
RAB38P57729 RNA5SP233-201ENST00000459153 113 ntBASIC1.7□□□□□ -2.14
RAB38P57729 RPL21P99-201ENST00000480369 423 ntBASIC1.7□□□□□ -2.14
RAB38P57729 RPL36AP48-201ENST00000485521 314 ntBASIC1.7□□□□□ -2.14
RAB38P57729 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
RAB38P57729 CKS1BP2-201ENST00000497342 240 ntBASIC1.7□□□□□ -2.14
RAB38P57729 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RAB38P57729 AC109445.1-201ENST00000512356 383 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB38P57729 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.7□□□□□ -2.14
RAB38P57729 RNU6-295P-201ENST00000516901 104 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB38P57729 AC012435.1-202ENST00000568772 240 ntBASIC1.7□□□□□ -2.14
RAB38P57729 MIR4529-201ENST00000578110 78 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.7□□□□□ -2.14
RAB38P57729 AC078899.2-201ENST00000595282 212 ntBASIC1.7□□□□□ -2.14
RAB38P57729 BNIP3P23-201ENST00000599655 511 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AL606834.3-201ENST00000602615 496 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB38P57729 MIR6845-201ENST00000613182 61 ntBASIC1.7□□□□□ -2.14
RAB38P57729 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RAB38P57729 MIR5739-201ENST00000619803 80 ntBASIC1.7□□□□□ -2.14
RAB38P57729 SDR42E1P4-201ENST00000620894 481 ntBASIC1.7□□□□□ -2.14
RAB38P57729 AC116618.1-201ENST00000634617 774 ntBASIC1.7□□□□□ -2.14
RAB38P57729 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
RAB38P57729 AC002543.1-201ENST00000299783 1954 ntBASIC1.7□□□□□ -2.14
RAB38P57729 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
RAB38P57729 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
RAB38P57729 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.69□□□□□ -2.14
RAB38P57729 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RAB38P57729 SNORD116-12-201ENST00000384468 92 ntBASIC1.69□□□□□ -2.14
RAB38P57729 RNU6-1257P-201ENST00000384625 110 ntBASIC1.69□□□□□ -2.14
RAB38P57729 RNU6-748P-201ENST00000384648 107 ntBASIC1.69□□□□□ -2.14
RAB38P57729 MIR1294-201ENST00000408503 142 ntBASIC1.69□□□□□ -2.14
RAB38P57729 AL359704.1-201ENST00000411586 781 ntBASIC1.69□□□□□ -2.14
RAB38P57729 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB38P57729 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.69□□□□□ -2.14
RAB38P57729 HMGB1P27-201ENST00000431429 603 ntBASIC1.69□□□□□ -2.14
RAB38P57729 AC005094.1-201ENST00000440420 368 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms