Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AMZ2P1-203ENST00000565833 850 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 AC068135.2-201ENST00000569293 1028 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN20P56880 AP000907.4-201ENST00000604143 237 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 DISC2.1-201ENST00000612827 205 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 MIR7112-201ENST00000616126 65 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 AC002553.4-201ENST00000616896 331 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN20P56880 AC017071.1-201ENST00000564407 2204 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN20P56880 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.96□□□□□ -1.93
CLDN20P56880 RNU6-451P-201ENST00000362921 107 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 SNORA51.4-201ENST00000364993 124 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 SNORA4.3-201ENST00000365564 137 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLDN20P56880 RNU6-140P-201ENST00000384566 108 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AL357075.1-201ENST00000404107 726 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 RN7SKP123-201ENST00000410732 291 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 USP9YP6-201ENST00000413550 854 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 MTND1P23-201ENST00000416931 372 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 MTND1P2-201ENST00000430604 821 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 SNRPEP9-201ENST00000436794 238 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 HMGN2P20-201ENST00000437531 273 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 RBMX2P4-201ENST00000441256 376 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN20P56880 Z75741.1-201ENST00000446793 314 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 CECR9-201ENST00000453421 199 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 RNU7-180P-201ENST00000459240 63 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 RPL23AP11-201ENST00000475260 469 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 RPL30P14-201ENST00000482744 348 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN20P56880 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN20P56880 AC010265.1-201ENST00000513509 211 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 RNU6-1315P-201ENST00000517187 99 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 SUB1P1-201ENST00000524415 382 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AP003122.3-201ENST00000526316 255 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AC084851.1-201ENST00000529105 249 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AL137161.1-201ENST00000532231 390 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLDN20P56880 HIGD1AP1-201ENST00000550979 275 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN20P56880 AL163153.1-201ENST00000554223 283 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.96□□□□□ -1.94
CLDN20P56880 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN20P56880 MIR4474-201ENST00000579189 78 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 MIR3609-201ENST00000582661 80 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN20P56880 NRBF2P5-201ENST00000603087 788 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN20P56880 AC004805.2-201ENST00000605382 482 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AC068831.7-201ENST00000616954 363 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.96□□□□□ -1.94
CLDN20P56880 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN20P56880 MAPK10-362ENST00000641864 4484 ntBASIC2.96□□□□□ -1.94
CLDN20P56880 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN20P56880 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN20P56880 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CLDN20P56880 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN20P56880 ASNSP3-201ENST00000451989 1306 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN20P56880 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN20P56880 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN20P56880 FTLP6-201ENST00000355274 422 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 RNU6-1035P-201ENST00000384477 107 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN20P56880 RNU6-1068P-201ENST00000410958 103 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.95□□□□□ -1.94
CLDN20P56880 RPL36AP53-201ENST00000432891 316 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN20P56880 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN20P56880 RPL38P4-201ENST00000502376 214 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN20P56880 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN20P56880 RNU4-29P-201ENST00000515943 174 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 RNA5SP165-201ENST00000517142 115 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN20P56880 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.95□□□□□ -1.94
CLDN20P56880 PSMA2P1-201ENST00000526365 646 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 AL138976.2-201ENST00000563989 694 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.95□□□□□ -1.94
CLDN20P56880 HSPE1P7-201ENST00000604681 321 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 FTX_3.1-201ENST00000610451 147 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 uc_338.1-201ENST00000612113 180 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.95□□□□□ -1.94
CLDN20P56880 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.95□□□□□ -1.94
CLDN20P56880 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.95□□□□□ -1.94
CLDN20P56880 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN20P56880 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN20P56880 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN20P56880 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLDN20P56880 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
CLDN20P56880 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLDN20P56880 HSPA8P4-201ENST00000511877 1920 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 NACAP2-201ENST00000318548 624 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CLDN20P56880 U3.19-201ENST00000390893 196 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 AL606923.1-201ENST00000406616 190 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 RNU2-68P-201ENST00000410878 191 ntBASIC2.94□□□□□ -1.94
CLDN20P56880 OR9R1P-201ENST00000412200 877 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms