Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU6-527P-201ENST00000363425 104 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 RNU6-898P-201ENST00000365627 104 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 SET-203ENST00000372688 801 ntTSL 2 BASIC3.95□□□□□ -1.78
GFRA1P56159 Y_RNA.618-201ENST00000410949 107 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 AC007389.2-201ENST00000434630 306 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.95□□□□□ -1.78
GFRA1P56159 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.95□□□□□ -1.78
GFRA1P56159 RPL23AP65-201ENST00000475608 468 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 AC108022.1-201ENST00000493466 478 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 AC093852.1-201ENST00000503587 266 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.95□□□□□ -1.78
GFRA1P56159 SNORA31.18-201ENST00000517043 134 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 AC040926.1-201ENST00000530195 238 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 TRAV8-5-201ENST00000537369 341 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA1P56159 MIR5701-3-201ENST00000578890 82 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.95□□□□□ -1.78
GFRA1P56159 MIR4697-201ENST00000582977 78 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 MIR5701-1-201ENST00000585138 82 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 MIR3138-201ENST00000585238 82 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 AC100812.1-201ENST00000607622 580 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 AL021879.1-201ENST00000611756 288 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 MIR5701-2-201ENST00000615634 82 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.95□□□□□ -1.78
GFRA1P56159 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.95□□□□□ -1.78
GFRA1P56159 MIR6830-201ENST00000636015 70 ntBASIC3.95□□□□□ -1.78
GFRA1P56159 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA1P56159 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.95□□□□□ -1.78
GFRA1P56159 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.95□□□□□ -1.78
GFRA1P56159 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA1P56159 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 CUL1P1-201ENST00000509510 2425 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
GFRA1P56159 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
GFRA1P56159 SNORD50.1-201ENST00000362987 71 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 RNU6-884P-201ENST00000363889 107 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 RNU6-105P-201ENST00000363909 104 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 Y_RNA.193-201ENST00000363979 102 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 RNY3P11-201ENST00000364153 102 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 SNORA70.2-201ENST00000364506 135 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 RNA5SP366-201ENST00000365454 123 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 Z98749.2-208ENST00000381646 500 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 RNU6-784P-201ENST00000384330 106 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 MIR628-201ENST00000385229 95 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 SAR1AP2-201ENST00000392696 594 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 BTF3L4P2-201ENST00000392798 346 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 MIR1252-201ENST00000408861 65 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 AC091390.1-201ENST00000433904 331 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 RPL23AP52-201ENST00000439311 478 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 CHEK2P4-201ENST00000450340 246 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 MTCO3P8-201ENST00000453691 755 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 RPS29P27-201ENST00000463711 170 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC109327.1-201ENST00000471666 403 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC010655.3-201ENST00000478818 450 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 RPL30P10-201ENST00000488148 337 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.94□□□□□ -1.78
GFRA1P56159 AC010265.1-201ENST00000513509 211 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 RNU1-61P-201ENST00000516107 151 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 SNORA43.2-201ENST00000516652 128 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC131281.1-201ENST00000522984 164 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.94□□□□□ -1.78
GFRA1P56159 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 AC011602.1-201ENST00000546484 331 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
GFRA1P56159 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.94□□□□□ -1.78
GFRA1P56159 RPL23AP97-201ENST00000568955 471 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC136624.4-201ENST00000573044 370 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.94□□□□□ -1.78
GFRA1P56159 AC024153.1-201ENST00000603103 365 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AL160290.3-201ENST00000604869 165 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AL590392.1-201ENST00000604960 446 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.94□□□□□ -1.78
GFRA1P56159 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 AC004825.2-201ENST00000616634 455 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AL713922.2-201ENST00000619384 716 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC140113.4-201ENST00000622087 222 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
GFRA1P56159 AC007546.2-201ENST00000623996 360 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 AC048347.1-201ENST00000624621 427 ntBASIC3.94□□□□□ -1.78
GFRA1P56159 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.94□□□□□ -1.78
GFRA1P56159 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA1P56159 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
GFRA1P56159 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms