Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC010631.1-201ENST00000474150 156 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 TRBV1-201ENST00000476502 284 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HMGCS2P54868 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.62□□□□□ -1.99
HMGCS2P54868 HMGB1P41-201ENST00000520234 440 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGCS2P54868 MIR4528-201ENST00000577763 90 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC023043.3-201ENST00000593113 385 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC020895.1-201ENST00000595362 272 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 SEPT7P9-203ENST00000604116 343 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC090578.1-201ENST00000604955 591 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AP000860.1-201ENST00000605250 559 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC121334.2-201ENST00000605387 271 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HMGCS2P54868 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC108479.2-201ENST00000617314 601 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC068880.5-201ENST00000624331 290 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 LRRC77P-213ENST00000637727 880 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC138915.1-201ENST00000565427 1685 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HMGCS2P54868 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HMGCS2P54868 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HMGCS2P54868 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HMGCS2P54868 RNU5E-1-201ENST00000362477 120 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 RNU6-511P-201ENST00000363496 107 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 RNA5SP99-201ENST00000364020 114 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 Y_RNA.359-201ENST00000365498 102 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 MIR514A1-201ENST00000385133 98 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HMGCS2P54868 AL023284.1-201ENST00000403956 276 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 GSTA9P-201ENST00000406231 611 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 RPL21P24-201ENST00000413752 448 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGCS2P54868 SPA17P1-201ENST00000416656 452 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGCS2P54868 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGCS2P54868 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.61□□□□□ -1.99
HMGCS2P54868 Z96811.1-201ENST00000445880 108 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 MTND1P12-201ENST00000455231 147 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 TPT1P7-201ENST00000458300 517 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 AC010587.1-201ENST00000505809 469 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 NDUFB4P2-201ENST00000509515 391 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 AC114797.1-201ENST00000514003 728 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 Y_RNA.672-201ENST00000516289 104 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGCS2P54868 HMGN1P28-201ENST00000521340 364 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 ELOCP31-201ENST00000540463 467 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGCS2P54868 AC024909.2-201ENST00000553035 286 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGCS2P54868 AC103987.3-201ENST00000582071 292 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGCS2P54868 AC040904.1-201ENST00000590850 223 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.61□□□□□ -1.99
HMGCS2P54868 AC090970.3-201ENST00000612566 866 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 AC008250.2-201ENST00000615261 205 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 AP001506.1-201ENST00000615444 211 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 MIR6766-201ENST00000622641 72 ntBASIC2.61□□□□□ -1.99
HMGCS2P54868 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HMGCS2P54868 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.61□□□□□ -1.99
HMGCS2P54868 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HMGCS2P54868 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HMGCS2P54868 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HMGCS2P54868 OR4G2P-202ENST00000641004 1759 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HMGCS2P54868 RNU5A-1-201ENST00000362698 116 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 Y_RNA.436-201ENST00000384097 102 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AL359634.1-202ENST00000404721 284 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 TXNP7-201ENST00000406296 293 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 RNU6-195P-201ENST00000411352 109 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 NDUFB4P7-201ENST00000423198 363 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.6□□□□□ -1.99
HMGCS2P54868 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS2P54868 AC008850.1-201ENST00000427546 362 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AC104850.1-201ENST00000435940 476 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 RPS24P1-201ENST00000438550 371 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.6□□□□□ -1.99
HMGCS2P54868 AC244505.5-201ENST00000443639 207 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.6□□□□□ -1.99
HMGCS2P54868 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGCS2P54868 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.6□□□□□ -1.99
HMGCS2P54868 AC108059.3-201ENST00000456388 214 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.6□□□□□ -1.99
HMGCS2P54868 snoU109.1-201ENST00000459339 135 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AL049874.1-201ENST00000489560 388 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS2P54868 RNA5SP337-201ENST00000517007 109 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 NRON-201ENST00000517270 370 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 CASP1P1-201ENST00000526345 212 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HMGCS2P54868 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.6□□□□□ -1.99
HMGCS2P54868 MIR3913-1-201ENST00000577744 102 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 NRBF2P1-201ENST00000587407 859 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AF038458.1-201ENST00000588406 262 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AC098614.4-201ENST00000607601 462 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AC010133.1-201ENST00000615809 842 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 AC110079.1-202ENST00000635213 138 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 MIR4275-201ENST00000636486 87 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms