Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SOX3P41225 AC103710.2-202ENST00000641454 2853 ntBASIC2.68□□□□□ -1.98
SOX3P41225 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SOX3P41225 RPL9P7-201ENST00000330965 580 ntBASIC2.68□□□□□ -1.98
SOX3P41225 SNORA80A-201ENST00000363922 136 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RNU6-270P-201ENST00000364131 105 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RNU6-7-201ENST00000364784 107 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RNU6-8-201ENST00000365467 107 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RNU6-1035P-201ENST00000384477 107 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RNU6-851P-201ENST00000384565 107 ntBASIC2.68□□□□□ -1.98
SOX3P41225 MIR181A2-201ENST00000384863 110 ntBASIC2.68□□□□□ -1.98
SOX3P41225 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SOX3P41225 CALM2P3-201ENST00000400429 449 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RNU6-1077P-201ENST00000410506 102 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RNA5SP38-201ENST00000410750 119 ntBASIC2.68□□□□□ -1.98
SOX3P41225 UBE2V1P10-201ENST00000414685 269 ntBASIC2.68□□□□□ -1.98
SOX3P41225 AL139281.1-201ENST00000422120 335 ntBASIC2.68□□□□□ -1.98
SOX3P41225 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SOX3P41225 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 FABP5P15-201ENST00000453566 214 ntBASIC2.68□□□□□ -1.98
SOX3P41225 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 RNU7-182P-201ENST00000459009 62 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RPL37P6-201ENST00000460682 294 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RPS26P21-201ENST00000475397 348 ntBASIC2.68□□□□□ -1.98
SOX3P41225 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.68□□□□□ -1.98
SOX3P41225 RN7SKP282-201ENST00000516824 299 ntBASIC2.68□□□□□ -1.98
SOX3P41225 RNU6-711P-201ENST00000517255 106 ntBASIC2.68□□□□□ -1.98
SOX3P41225 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX3P41225 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.68□□□□□ -1.98
SOX3P41225 AC008521.1-201ENST00000587471 187 ntBASIC2.68□□□□□ -1.98
SOX3P41225 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.68□□□□□ -1.98
SOX3P41225 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX3P41225 AC023043.3-201ENST00000593113 385 ntBASIC2.68□□□□□ -1.98
SOX3P41225 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 BNIP3P9-201ENST00000603714 553 ntBASIC2.68□□□□□ -1.98
SOX3P41225 AC004492.1-201ENST00000607036 742 ntBASIC2.68□□□□□ -1.98
SOX3P41225 AP001330.5-201ENST00000607176 411 ntBASIC2.68□□□□□ -1.98
SOX3P41225 AF250324.2-201ENST00000608299 610 ntBASIC2.68□□□□□ -1.98
SOX3P41225 AC130324.3-201ENST00000614165 542 ntBASIC2.68□□□□□ -1.98
SOX3P41225 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 SEPT14P19-203ENST00000633205 211 ntBASIC2.68□□□□□ -1.98
SOX3P41225 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX3P41225 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.68□□□□□ -1.98
SOX3P41225 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
SOX3P41225 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SOX3P41225 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
SOX3P41225 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SOX3P41225 AL359693.1-201ENST00000614959 2407 ntBASIC2.67□□□□□ -1.98
SOX3P41225 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SOX3P41225 AC093010.3-201ENST00000570269 15214 ntBASIC2.67□□□□□ -1.98
SOX3P41225 Y_RNA.6-201ENST00000362350 114 ntBASIC2.67□□□□□ -1.98
SOX3P41225 SNORD115-7-201ENST00000365306 82 ntBASIC2.67□□□□□ -1.98
SOX3P41225 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.67□□□□□ -1.98
SOX3P41225 RNU6-190P-201ENST00000384154 102 ntBASIC2.67□□□□□ -1.98
SOX3P41225 RNU6-140P-201ENST00000384566 108 ntBASIC2.67□□□□□ -1.98
SOX3P41225 Y_RNA.534-201ENST00000384599 112 ntBASIC2.67□□□□□ -1.98
SOX3P41225 RNU2-9P-201ENST00000410194 145 ntBASIC2.67□□□□□ -1.98
SOX3P41225 Y_RNA.599-201ENST00000410489 109 ntBASIC2.67□□□□□ -1.98
SOX3P41225 RNU6-387P-201ENST00000411331 105 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AC092809.3-201ENST00000415453 231 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
SOX3P41225 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.67□□□□□ -1.98
SOX3P41225 ZNF885P-201ENST00000420174 1098 ntBASIC2.67□□□□□ -1.98
SOX3P41225 ZNF863P-201ENST00000426746 417 ntBASIC2.67□□□□□ -1.98
SOX3P41225 GPM6BP2-201ENST00000432046 144 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AL591212.2-201ENST00000433923 257 ntBASIC2.67□□□□□ -1.98
SOX3P41225 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.67□□□□□ -1.98
SOX3P41225 AL135938.1-201ENST00000443141 297 ntBASIC2.67□□□□□ -1.98
SOX3P41225 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.67□□□□□ -1.98
SOX3P41225 GPM6BP1-201ENST00000446387 144 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AL356010.1-201ENST00000456364 102 ntBASIC2.67□□□□□ -1.98
SOX3P41225 SRRM1P2-201ENST00000464531 1192 ntBASIC2.67□□□□□ -1.98
SOX3P41225 RN7SL499P-201ENST00000481141 276 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AC019235.1-201ENST00000503847 207 ntBASIC2.67□□□□□ -1.98
SOX3P41225 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.67□□□□□ -1.98
SOX3P41225 AC105417.1-201ENST00000514691 285 ntBASIC2.67□□□□□ -1.98
SOX3P41225 SNORA31.1-201ENST00000515993 133 ntBASIC2.67□□□□□ -1.98
SOX3P41225 SNORA31.5-201ENST00000516190 133 ntBASIC2.67□□□□□ -1.98
SOX3P41225 RNU1-103P-201ENST00000516502 125 ntBASIC2.67□□□□□ -1.98
SOX3P41225 RNU6-928P-201ENST00000516876 104 ntBASIC2.67□□□□□ -1.98
SOX3P41225 OR5AL2P-201ENST00000532185 920 ntBASIC2.67□□□□□ -1.98
SOX3P41225 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SOX3P41225 ADI1P3-201ENST00000549509 470 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.67□□□□□ -1.98
SOX3P41225 AC092954.2-201ENST00000609103 430 ntBASIC2.67□□□□□ -1.98
SOX3P41225 FTX_3.1-201ENST00000610451 147 ntBASIC2.67□□□□□ -1.98
SOX3P41225 MIR7106-201ENST00000612419 65 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AC012409.4-201ENST00000612923 249 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AL359547.2-201ENST00000615810 418 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AC068792.1-201ENST00000621354 417 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AC006111.3-201ENST00000622137 383 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AC011155.2-201ENST00000623202 216 ntBASIC2.67□□□□□ -1.98
SOX3P41225 AC139792.3-201ENST00000623525 224 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms