Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNU6-658P-201ENST00000384606 106 ntBASIC3.06□□□□□ -1.92
HADHAP40939 MIR128-1-201ENST00000384921 82 ntBASIC3.06□□□□□ -1.92
HADHAP40939 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HADHAP40939 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
HADHAP40939 FO393413.1-201ENST00000402892 195 ntBASIC3.06□□□□□ -1.92
HADHAP40939 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.06□□□□□ -1.92
HADHAP40939 AL160275.3-201ENST00000423876 471 ntBASIC3.06□□□□□ -1.92
HADHAP40939 RPL7P37-201ENST00000425095 738 ntBASIC3.06□□□□□ -1.92
HADHAP40939 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.06□□□□□ -1.92
HADHAP40939 WASF1P1-201ENST00000447560 1131 ntBASIC3.06□□□□□ -1.92
HADHAP40939 HMGN2P10-201ENST00000448085 265 ntBASIC3.06□□□□□ -1.92
HADHAP40939 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.06□□□□□ -1.92
HADHAP40939 RNU7-182P-201ENST00000459009 62 ntBASIC3.06□□□□□ -1.92
HADHAP40939 S100A11P2-201ENST00000467589 312 ntBASIC3.06□□□□□ -1.92
HADHAP40939 RN7SL20P-201ENST00000488827 297 ntBASIC3.06□□□□□ -1.92
HADHAP40939 AC139453.3-201ENST00000493276 369 ntBASIC3.06□□□□□ -1.92
HADHAP40939 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.06□□□□□ -1.92
HADHAP40939 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
HADHAP40939 RNU6-123P-201ENST00000516163 102 ntBASIC3.06□□□□□ -1.92
HADHAP40939 RNU6-405P-201ENST00000516637 110 ntBASIC3.06□□□□□ -1.92
HADHAP40939 RN7SKP272-201ENST00000516988 232 ntBASIC3.06□□□□□ -1.92
HADHAP40939 AC009902.1-201ENST00000519351 183 ntBASIC3.06□□□□□ -1.92
HADHAP40939 MTCYBP20-201ENST00000524239 1129 ntBASIC3.06□□□□□ -1.92
HADHAP40939 OR4R1P-201ENST00000529879 463 ntBASIC3.06□□□□□ -1.92
HADHAP40939 OR5BN1P-201ENST00000532955 829 ntBASIC3.06□□□□□ -1.92
HADHAP40939 HSPE1P20-201ENST00000538133 289 ntBASIC3.06□□□□□ -1.92
HADHAP40939 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.06□□□□□ -1.92
HADHAP40939 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.06□□□□□ -1.92
HADHAP40939 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.06□□□□□ -1.92
HADHAP40939 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.06□□□□□ -1.92
HADHAP40939 AC087683.1-201ENST00000591187 441 ntBASIC3.06□□□□□ -1.92
HADHAP40939 NDUFA8P1-201ENST00000605525 367 ntBASIC3.06□□□□□ -1.92
HADHAP40939 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.06□□□□□ -1.92
HADHAP40939 AC093648.1-201ENST00000623546 606 ntBASIC3.06□□□□□ -1.92
HADHAP40939 AC005609.4-201ENST00000625071 447 ntBASIC3.06□□□□□ -1.92
HADHAP40939 SEPT14P19-203ENST00000633205 211 ntBASIC3.06□□□□□ -1.92
HADHAP40939 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
HADHAP40939 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.05□□□□□ -1.92
HADHAP40939 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HADHAP40939 MIR22-201ENST00000362190 85 ntBASIC3.05□□□□□ -1.92
HADHAP40939 RNU4-24P-201ENST00000364565 139 ntBASIC3.05□□□□□ -1.92
HADHAP40939 Y_RNA.359-201ENST00000365498 102 ntBASIC3.05□□□□□ -1.92
HADHAP40939 RNU4-48P-201ENST00000365559 182 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HADHAP40939 RNU6-606P-201ENST00000384721 111 ntBASIC3.05□□□□□ -1.92
HADHAP40939 MIR627-201ENST00000384979 97 ntBASIC3.05□□□□□ -1.92
HADHAP40939 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.05□□□□□ -1.92
HADHAP40939 RNU6-1025P-201ENST00000410629 104 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AC023141.4-201ENST00000412031 328 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AC009414.1-201ENST00000427200 443 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.05□□□□□ -1.92
HADHAP40939 MTCO2P11-201ENST00000431069 680 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.05□□□□□ -1.92
HADHAP40939 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.05□□□□□ -1.92
HADHAP40939 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.05□□□□□ -1.92
HADHAP40939 RPS3AP17-201ENST00000472594 777 ntBASIC3.05□□□□□ -1.92
HADHAP40939 TRBV1-201ENST00000476502 284 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AC079382.1-201ENST00000493346 557 ntBASIC3.05□□□□□ -1.92
HADHAP40939 EIF4EP3-201ENST00000498782 656 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.05□□□□□ -1.92
HADHAP40939 HMGB1P29-201ENST00000505659 499 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.05□□□□□ -1.92
HADHAP40939 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.05□□□□□ -1.92
HADHAP40939 AC098591.2-201ENST00000510152 315 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AC021739.1-201ENST00000559631 174 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AC008521.1-201ENST00000587471 187 ntBASIC3.05□□□□□ -1.92
HADHAP40939 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.05□□□□□ -1.92
HADHAP40939 AL158032.1-201ENST00000605401 106 ntBASIC3.05□□□□□ -1.92
HADHAP40939 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HADHAP40939 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.05□□□□□ -1.92
HADHAP40939 AC084035.1-201ENST00000634543 607 ntBASIC3.05□□□□□ -1.92
HADHAP40939 U6.99-201ENST00000637524 83 ntBASIC3.05□□□□□ -1.92
HADHAP40939 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HADHAP40939 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HADHAP40939 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HADHAP40939 RNU6-282P-201ENST00000365357 103 ntBASIC3.04□□□□□ -1.92
HADHAP40939 U8.9-201ENST00000365667 134 ntBASIC3.04□□□□□ -1.92
HADHAP40939 SNORA40C-201ENST00000391285 128 ntBASIC3.04□□□□□ -1.92
HADHAP40939 SNORA26.7-201ENST00000391288 122 ntBASIC3.04□□□□□ -1.92
HADHAP40939 RPL21P75-201ENST00000396599 483 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AL512633.1-201ENST00000399931 655 ntBASIC3.04□□□□□ -1.92
HADHAP40939 RPL21P28-201ENST00000401418 483 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AL592114.1-201ENST00000403842 483 ntBASIC3.04□□□□□ -1.92
HADHAP40939 RNU2-25P-201ENST00000411041 191 ntBASIC3.04□□□□□ -1.92
HADHAP40939 RNA5SP344-201ENST00000411081 104 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.04□□□□□ -1.92
HADHAP40939 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.04□□□□□ -1.92
HADHAP40939 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.04□□□□□ -1.92
HADHAP40939 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.04□□□□□ -1.92
HADHAP40939 AL078601.1-201ENST00000444542 271 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AL671855.1-201ENST00000446875 1203 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.04□□□□□ -1.92
HADHAP40939 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.04□□□□□ -1.92
HADHAP40939 RPL21P39-201ENST00000463605 483 ntBASIC3.04□□□□□ -1.92
HADHAP40939 GMFBP1-201ENST00000467831 427 ntBASIC3.04□□□□□ -1.92
HADHAP40939 RPL31P41-201ENST00000477967 372 ntBASIC3.04□□□□□ -1.92
HADHAP40939 RPL21P93-201ENST00000480465 489 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.04□□□□□ -1.92
HADHAP40939 AC087190.1-201ENST00000484462 480 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AC093591.1-201ENST00000491435 481 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms