Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR1302-6-201ENST00000408466 90 ntBASIC5.03□□□□□ -1.6
RXRBP28702 RNU2-21P-201ENST00000410368 188 ntBASIC5.03□□□□□ -1.6
RXRBP28702 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.03□□□□□ -1.6
RXRBP28702 RPL21P109-201ENST00000422213 475 ntBASIC5.03□□□□□ -1.6
RXRBP28702 AC139712.2-201ENST00000424302 339 ntBASIC5.03□□□□□ -1.6
RXRBP28702 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.03□□□□□ -1.6
RXRBP28702 CALM2P2-201ENST00000428512 440 ntBASIC5.03□□□□□ -1.6
RXRBP28702 AC011816.1-201ENST00000441346 546 ntBASIC5.03□□□□□ -1.6
RXRBP28702 AC108145.1-201ENST00000503770 153 ntBASIC5.03□□□□□ -1.6
RXRBP28702 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.03□□□□□ -1.6
RXRBP28702 RNU6-323P-201ENST00000521915 107 ntBASIC5.03□□□□□ -1.6
RXRBP28702 RANP3-201ENST00000530970 276 ntBASIC5.03□□□□□ -1.6
RXRBP28702 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.03□□□□□ -1.6
RXRBP28702 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.03□□□□□ -1.6
RXRBP28702 MIR5188-201ENST00000583467 113 ntBASIC5.03□□□□□ -1.6
RXRBP28702 AC096772.1-201ENST00000609146 564 ntBASIC5.03□□□□□ -1.6
RXRBP28702 AC103858.2-201ENST00000621471 543 ntBASIC5.03□□□□□ -1.6
RXRBP28702 AL512643.1-201ENST00000635735 524 ntBASIC5.03□□□□□ -1.6
RXRBP28702 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.03□□□□□ -1.6
RXRBP28702 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RXRBP28702 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RXRBP28702 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RXRBP28702 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RXRBP28702 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RXRBP28702 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RXRBP28702 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.02□□□□□ -1.61
RXRBP28702 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
RXRBP28702 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RXRBP28702 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RXRBP28702 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RXRBP28702 SNORD9-201ENST00000362566 104 ntBASIC5.02□□□□□ -1.61
RXRBP28702 SNORA20.1-201ENST00000364790 130 ntBASIC5.02□□□□□ -1.61
RXRBP28702 RNU6-715P-201ENST00000365204 103 ntBASIC5.02□□□□□ -1.61
RXRBP28702 SNORD14.1-201ENST00000365609 90 ntBASIC5.02□□□□□ -1.61
RXRBP28702 RNU6-946P-201ENST00000383878 107 ntBASIC5.02□□□□□ -1.61
RXRBP28702 RNU6-432P-201ENST00000384196 109 ntBASIC5.02□□□□□ -1.61
RXRBP28702 Y_RNA.515-201ENST00000384535 112 ntBASIC5.02□□□□□ -1.61
RXRBP28702 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.02□□□□□ -1.61
RXRBP28702 GAPDHP27-201ENST00000447427 1020 ntBASIC5.02□□□□□ -1.61
RXRBP28702 RN7SL504P-201ENST00000494496 287 ntBASIC5.02□□□□□ -1.61
RXRBP28702 AC105758.1-201ENST00000506038 399 ntBASIC5.02□□□□□ -1.61
RXRBP28702 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.02□□□□□ -1.61
RXRBP28702 Y_RNA.673-201ENST00000516306 88 ntBASIC5.02□□□□□ -1.61
RXRBP28702 RN7SKP82-201ENST00000516786 223 ntBASIC5.02□□□□□ -1.61
RXRBP28702 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.02□□□□□ -1.61
RXRBP28702 AC107918.3-201ENST00000533272 382 ntBASIC5.02□□□□□ -1.61
RXRBP28702 AC026371.1-201ENST00000551867 419 ntBASIC5.02□□□□□ -1.61
RXRBP28702 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.02□□□□□ -1.61
RXRBP28702 MIR4716-201ENST00000579628 84 ntBASIC5.02□□□□□ -1.61
RXRBP28702 MIR4276-201ENST00000584832 70 ntBASIC5.02□□□□□ -1.61
RXRBP28702 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.02□□□□□ -1.61
RXRBP28702 AC104763.2-201ENST00000604179 382 ntBASIC5.02□□□□□ -1.61
RXRBP28702 MTND4LP5-201ENST00000605152 292 ntBASIC5.02□□□□□ -1.61
RXRBP28702 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.02□□□□□ -1.61
RXRBP28702 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.02□□□□□ -1.61
RXRBP28702 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RXRBP28702 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RXRBP28702 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
RXRBP28702 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RXRBP28702 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RXRBP28702 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RXRBP28702 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RXRBP28702 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RXRBP28702 Y_RNA.64-201ENST00000362845 102 ntBASIC5.01□□□□□ -1.61
RXRBP28702 RNU6-1078P-201ENST00000364522 103 ntBASIC5.01□□□□□ -1.61
RXRBP28702 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.01□□□□□ -1.61
RXRBP28702 RNU6-146P-201ENST00000384602 108 ntBASIC5.01□□□□□ -1.61
RXRBP28702 RNU6-1093P-201ENST00000391194 107 ntBASIC5.01□□□□□ -1.61
RXRBP28702 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.01□□□□□ -1.61
RXRBP28702 MTND5P15-201ENST00000434246 349 ntBASIC5.01□□□□□ -1.61
RXRBP28702 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.01□□□□□ -1.61
RXRBP28702 RPL9P32-201ENST00000464118 620 ntBASIC5.01□□□□□ -1.61
RXRBP28702 RPL27AP5-201ENST00000469428 449 ntBASIC5.01□□□□□ -1.61
RXRBP28702 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.01□□□□□ -1.61
RXRBP28702 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.01□□□□□ -1.61
RXRBP28702 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.01□□□□□ -1.61
RXRBP28702 AC092470.1-201ENST00000546187 132 ntBASIC5.01□□□□□ -1.61
RXRBP28702 AC005899.2-201ENST00000584353 90 ntBASIC5.01□□□□□ -1.61
RXRBP28702 RAC1P9-201ENST00000604990 392 ntBASIC5.01□□□□□ -1.61
RXRBP28702 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RXRBP28702 MIR7106-201ENST00000612419 65 ntBASIC5.01□□□□□ -1.61
RXRBP28702 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
RXRBP28702 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RXRBP28702 ZNF72P-201ENST00000425869 1908 ntBASIC5.01□□□□□ -1.61
RXRBP28702 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RXRBP28702 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RXRBP28702 MFSD8-236ENST00000641509 4050 ntBASIC5.01□□□□□ -1.61
RXRBP28702 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RXRBP28702 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RXRBP28702 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
RXRBP28702 AL031595.2-201ENST00000624215 19071 ntBASIC5□□□□□ -1.61
RXRBP28702 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5□□□□□ -1.61
RXRBP28702 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RXRBP28702 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5□□□□□ -1.61
RXRBP28702 Y_RNA.785-201ENST00000384290 109 ntBASIC5□□□□□ -1.61
RXRBP28702 RPL7AP73-201ENST00000413490 353 ntBASIC5□□□□□ -1.61
RXRBP28702 AL359672.1-201ENST00000442302 409 ntBASIC5□□□□□ -1.61
RXRBP28702 RPL39P38-201ENST00000467018 153 ntBASIC5□□□□□ -1.61
RXRBP28702 AC096745.1-201ENST00000509945 370 ntBASIC5□□□□□ -1.61
RXRBP28702 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms