Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFSF4P23510 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFSF4P23510 AC008121.1-201ENST00000603244 268 ntBASIC3.36□□□□□ -1.87
TNFSF4P23510 APOOP1-201ENST00000604695 592 ntBASIC3.36□□□□□ -1.87
TNFSF4P23510 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.36□□□□□ -1.87
TNFSF4P23510 ATP5A1P2-202ENST00000616464 443 ntBASIC3.36□□□□□ -1.87
TNFSF4P23510 MIR6875-201ENST00000617506 72 ntBASIC3.36□□□□□ -1.87
TNFSF4P23510 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFSF4P23510 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.36□□□□□ -1.87
TNFSF4P23510 RNA5SP196-201ENST00000625967 102 ntBASIC3.36□□□□□ -1.87
TNFSF4P23510 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TNFSF4P23510 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFSF4P23510 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFSF4P23510 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TNFSF4P23510 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TNFSF4P23510 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFSF4P23510 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
TNFSF4P23510 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
TNFSF4P23510 MIR372-201ENST00000362225 67 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 RNU6-876P-201ENST00000391295 104 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 AL096701.2-201ENST00000416920 238 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFSF4P23510 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFSF4P23510 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFSF4P23510 GOT2P5-201ENST00000433995 546 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 AL358232.1-201ENST00000448030 501 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 RPL23AP14-201ENST00000468281 468 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 AC087884.1-201ENST00000469738 328 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFSF4P23510 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TNFSF4P23510 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.35□□□□□ -1.87
TNFSF4P23510 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TNFSF4P23510 AC087854.1-201ENST00000519706 414 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 AC090136.1-201ENST00000520009 240 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFSF4P23510 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFSF4P23510 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.35□□□□□ -1.87
TNFSF4P23510 AL133393.1-201ENST00000603277 287 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFSF4P23510 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
TNFSF4P23510 AC093913.1-201ENST00000614178 329 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 CR392039.5-201ENST00000623201 510 ntBASIC3.35□□□□□ -1.87
TNFSF4P23510 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFSF4P23510 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF4P23510 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
TNFSF4P23510 IPO8P1-201ENST00000455509 3109 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFSF4P23510 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFSF4P23510 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TNFSF4P23510 RNA5SP399-201ENST00000364003 117 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 AL356967.1-201ENST00000406305 431 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 RPS15AP6-201ENST00000420703 385 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 AL358075.3-201ENST00000426289 226 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 AC087650.1-201ENST00000431445 468 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.34□□□□□ -1.87
TNFSF4P23510 RPS29P12-201ENST00000460178 152 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 AC117503.1-201ENST00000472241 394 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFSF4P23510 AC114781.4-201ENST00000513707 639 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFSF4P23510 CYCSP30-201ENST00000546447 172 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFSF4P23510 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF4P23510 MIR5692C1-201ENST00000585309 91 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF4P23510 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFSF4P23510 AL357078.3-201ENST00000607528 618 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 AL121757.2-201ENST00000611223 313 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 DUXAP9-208ENST00000622815 614 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF4P23510 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.34□□□□□ -1.87
TNFSF4P23510 RPS4XP5-202ENST00000449995 1334 ntBASIC3.34□□□□□ -1.87
TNFSF4P23510 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TNFSF4P23510 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
TNFSF4P23510 AL021368.2-201ENST00000606125 5352 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TNFSF4P23510 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFSF4P23510 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFSF4P23510 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TNFSF4P23510 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TNFSF4P23510 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 RNU5E-7P-201ENST00000365290 117 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 RNU6-19P-201ENST00000384718 107 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 MT-TL1-201ENST00000386347 75 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 SNORA3.3-201ENST00000408712 125 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFSF4P23510 PTGES3P4-201ENST00000426243 356 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AC009414.1-201ENST00000427200 443 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFSF4P23510 AL365400.1-201ENST00000431854 640 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AL441985.1-201ENST00000457727 251 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AC010486.1-201ENST00000511793 424 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AC025465.4-201ENST00000513422 638 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AC109479.2-201ENST00000517842 174 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 BTF3P12-201ENST00000519620 469 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 RNU6-323P-201ENST00000521915 107 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 OR1M4P-201ENST00000589199 287 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AL391813.1-201ENST00000603098 260 ntBASIC3.33□□□□□ -1.88
TNFSF4P23510 AC024153.1-201ENST00000603103 365 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms