Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 USMG5P1-201ENST00000425964 177 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AL160004.2-201ENST00000432935 350 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPN1P18031 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPN1P18031 RPS24P13-201ENST00000442520 397 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPN1P18031 NOTCH2P1-201ENST00000443481 624 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 SNORA84-201ENST00000459229 133 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 RPL7P5-201ENST00000471472 736 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AL135752.1-201ENST00000479477 471 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 HMGB1P30-201ENST00000492455 606 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AL359273.1-201ENST00000510918 627 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPN1P18031 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.08□□□□□ -1.76
PTPN1P18031 RNU6-470P-201ENST00000515954 104 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 Y_RNA.661-201ENST00000516003 99 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AC104576.1-201ENST00000524225 88 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPN1P18031 AL157871.3-201ENST00000557231 293 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPN1P18031 OR1M4P-201ENST00000589199 287 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 BNIP3P16-201ENST00000589779 534 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPN1P18031 AL136964.1-201ENST00000622038 2990 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 AL732372.2-225ENST00000642124 456 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN1P18031 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PTPN1P18031 IPO8P1-201ENST00000455509 3109 ntBASIC4.08□□□□□ -1.76
PTPN1P18031 UBE3AP2-201ENST00000429033 2259 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPN1P18031 Y_RNA.158-201ENST00000363651 101 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 RNU6-463P-201ENST00000384340 107 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 MRPL42P3-201ENST00000401492 326 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 CYCSP33-201ENST00000414485 327 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 EI24P1-201ENST00000416584 867 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 AC097713.2-201ENST00000430199 356 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 FTH1P6-201ENST00000430768 320 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 RNU7-187P-201ENST00000458985 68 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 RN7SL542P-201ENST00000467147 294 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 RPS20P22-201ENST00000473700 357 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 AC022493.1-201ENST00000492984 337 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPN1P18031 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPN1P18031 SNORA25.10-201ENST00000515926 124 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 AC023632.4-201ENST00000517783 191 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTPN1P18031 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPN1P18031 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPN1P18031 AC074050.1-201ENST00000563247 211 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 AC087499.8-201ENST00000578406 226 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 MIR4680-201ENST00000580906 66 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.07□□□□□ -1.76
PTPN1P18031 AC007485.1-201ENST00000616755 206 ntBASIC4.07□□□□□ -1.76
PTPN1P18031 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPN1P18031 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PTPN1P18031 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN1P18031 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PTPN1P18031 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN1P18031 FAM35DP-201ENST00000323387 2712 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN1P18031 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PTPN1P18031 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN1P18031 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN1P18031 Y_RNA.2-201ENST00000362330 96 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 Y_RNA.33-201ENST00000362591 102 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 RNU6-490P-201ENST00000362985 107 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 RNU6-1309P-201ENST00000363305 108 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 Y_RNA.324-201ENST00000365165 102 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 RNU6-395P-201ENST00000365662 106 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 RN7SKP177-201ENST00000410567 355 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 RPS15AP6-201ENST00000420703 385 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 UBE2D3P2-201ENST00000424409 445 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 AL445584.1-201ENST00000431451 330 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN1P18031 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN1P18031 HMGN2P21-201ENST00000447764 270 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN1P18031 snoU13.4-201ENST00000458916 104 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN1P18031 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PTPN1P18031 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN1P18031 SCARNA16.2-201ENST00000516520 172 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 RNA5SP164-201ENST00000516533 110 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 RNU6-1256P-201ENST00000516539 103 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 RNU6-307P-201ENST00000516743 106 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 RNU1-45P-201ENST00000517191 141 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN1P18031 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN1P18031 AL355810.1-201ENST00000614629 552 ntBASIC4.06□□□□□ -1.76
PTPN1P18031 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN1P18031 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN1P18031 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN1P18031 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN1P18031 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN1P18031 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN1P18031 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN1P18031 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN1P18031 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN1P18031 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN1P18031 ZNF807-201ENST00000328088 1707 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms