Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC008571.1-201ENST00000467232 300 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 RPS23P3-201ENST00000470993 430 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.36□□□□□ -1.71
ITGA4P13612 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ITGA4P13612 IGKV2-38-201ENST00000517443 247 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 AF186190.1-201ENST00000517470 480 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 AC084851.1-201ENST00000529105 249 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 AC004817.2-201ENST00000561794 651 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.36□□□□□ -1.71
ITGA4P13612 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.36□□□□□ -1.71
ITGA4P13612 AC104695.3-201ENST00000604052 296 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.36□□□□□ -1.71
ITGA4P13612 MIR4727-201ENST00000622232 55 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 AL354798.1-201ENST00000622505 329 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.36□□□□□ -1.71
ITGA4P13612 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.35□□□□□ -1.71
ITGA4P13612 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.35□□□□□ -1.71
ITGA4P13612 Y_RNA.153-201ENST00000363615 91 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 Y_RNA.193-201ENST00000363979 102 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 SNORA62.3-201ENST00000365110 153 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 RNU6-26P-201ENST00000383985 107 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 RNU6-213P-201ENST00000384051 104 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 RNU6-790P-201ENST00000384479 105 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 Z85995.1-201ENST00000415547 335 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 AL158156.1-201ENST00000422509 473 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 AC007389.2-201ENST00000434630 306 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 HMGB1P12-201ENST00000438594 598 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 AC011816.1-201ENST00000441346 546 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 RPL9P32-201ENST00000464118 620 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 RPS20P22-201ENST00000473700 357 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.35□□□□□ -1.71
ITGA4P13612 AC011005.2-201ENST00000487324 359 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 AC068781.1-201ENST00000488231 618 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 RPL31P61-201ENST00000496160 376 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 SLC25A15P5-201ENST00000508033 253 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 AC113155.1-201ENST00000511141 769 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 RNA5SP179-201ENST00000517284 121 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.35□□□□□ -1.71
ITGA4P13612 GNAI2P1-201ENST00000541815 315 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.35□□□□□ -1.71
ITGA4P13612 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.35□□□□□ -1.71
ITGA4P13612 MIR3921-201ENST00000577308 85 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 AC113195.1-201ENST00000579952 141 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.35□□□□□ -1.71
ITGA4P13612 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.35□□□□□ -1.71
ITGA4P13612 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.35□□□□□ -1.71
ITGA4P13612 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.35□□□□□ -1.71
ITGA4P13612 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.35□□□□□ -1.71
ITGA4P13612 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ITGA4P13612 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ITGA4P13612 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ITGA4P13612 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.34□□□□□ -1.71
ITGA4P13612 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ITGA4P13612 RNU6ATAC-201ENST00000408749 126 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 RNU6-325P-201ENST00000411132 105 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ITGA4P13612 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.34□□□□□ -1.71
ITGA4P13612 BX276092.3-201ENST00000424182 230 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 USP9YP7-201ENST00000436723 430 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.34□□□□□ -1.71
ITGA4P13612 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.34□□□□□ -1.71
ITGA4P13612 USP9YP32-201ENST00000452432 430 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.34□□□□□ -1.71
ITGA4P13612 AL359273.1-201ENST00000510918 627 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.34□□□□□ -1.71
ITGA4P13612 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.34□□□□□ -1.71
ITGA4P13612 AC091167.4-201ENST00000605079 184 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 AC006133.1-201ENST00000617106 264 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.34□□□□□ -1.71
ITGA4P13612 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.34□□□□□ -1.71
ITGA4P13612 AL773545.4-201ENST00000637262 310 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.34□□□□□ -1.71
ITGA4P13612 AL513478.4-201ENST00000641636 310 ntBASIC4.34□□□□□ -1.71
ITGA4P13612 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
ITGA4P13612 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
ITGA4P13612 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ITGA4P13612 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.72
ITGA4P13612 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ITGA4P13612 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ITGA4P13612 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.33□□□□□ -1.72
ITGA4P13612 NCAPGP1-201ENST00000505112 1814 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ITGA4P13612 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ITGA4P13612 RNU6-1181P-201ENST00000384191 106 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 Y_RNA.485-201ENST00000384395 102 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 MIR1302-3-201ENST00000408128 138 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.33□□□□□ -1.72
ITGA4P13612 RPL27AP8-201ENST00000424277 446 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 AC093151.1-201ENST00000427711 313 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms