Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
VCANP13611 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
VCANP13611 Y_RNA.293-201ENST00000364908 93 ntBASIC0.18□□□□□ -2.38
VCANP13611 AC097493.1-201ENST00000463958 372 ntBASIC0.18□□□□□ -2.38
VCANP13611 UBL5P1-201ENST00000507979 193 ntBASIC0.18□□□□□ -2.38
VCANP13611 MIR4658-201ENST00000584344 65 ntBASIC0.18□□□□□ -2.38
VCANP13611 AP003122.6-201ENST00000623831 495 ntBASIC0.18□□□□□ -2.38
VCANP13611 RNU4-9P-201ENST00000364951 139 ntBASIC0.18□□□□□ -2.38
VCANP13611 MIR627-201ENST00000384979 97 ntBASIC0.18□□□□□ -2.38
VCANP13611 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.18□□□□□ -2.38
VCANP13611 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.18□□□□□ -2.38
VCANP13611 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
VCANP13611 AP003476.1-201ENST00000623984 516 ntBASIC0.18□□□□□ -2.38
VCANP13611 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
VCANP13611 AC136628.3-201ENST00000521868 290 ntBASIC0.17□□□□□ -2.38
VCANP13611 AP006587.4-201ENST00000526053 529 ntBASIC0.17□□□□□ -2.38
VCANP13611 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.17□□□□□ -2.38
VCANP13611 Y_RNA.551-201ENST00000384661 102 ntBASIC0.17□□□□□ -2.38
VCANP13611 MIR224-201ENST00000384889 81 ntBASIC0.17□□□□□ -2.38
VCANP13611 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.17□□□□□ -2.38
VCANP13611 NDUFB4P2-201ENST00000509515 391 ntBASIC0.17□□□□□ -2.38
VCANP13611 AL158211.1-201ENST00000566763 763 ntBASIC0.17□□□□□ -2.38
VCANP13611 AC012676.2-201ENST00000619258 186 ntBASIC0.17□□□□□ -2.38
VCANP13611 AC123767.1-202ENST00000620407 817 ntBASIC0.17□□□□□ -2.38
VCANP13611 RNA5SP451-201ENST00000410588 110 ntBASIC0.17□□□□□ -2.38
VCANP13611 RPL36AP53-201ENST00000432891 316 ntBASIC0.17□□□□□ -2.38
VCANP13611 RNU6-711P-201ENST00000517255 106 ntBASIC0.17□□□□□ -2.38
VCANP13611 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.17□□□□□ -2.38
VCANP13611 AC068714.1-201ENST00000559623 800 ntBASIC0.17□□□□□ -2.38
VCANP13611 AC087821.2-201ENST00000637086 450 ntBASIC0.17□□□□□ -2.38
VCANP13611 AC121333.1-201ENST00000567488 2709 ntBASIC0.17□□□□□ -2.38
VCANP13611 RNU6-46P-201ENST00000383860 107 ntBASIC0.16□□□□□ -2.38
VCANP13611 AC023141.4-201ENST00000412031 328 ntBASIC0.16□□□□□ -2.38
VCANP13611 AC133963.2-201ENST00000513686 578 ntBASIC0.16□□□□□ -2.38
VCANP13611 Y_RNA.684-201ENST00000516510 99 ntBASIC0.16□□□□□ -2.38
VCANP13611 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.16□□□□□ -2.38
VCANP13611 Z83818.1-201ENST00000603584 150 ntBASIC0.16□□□□□ -2.38
VCANP13611 AL355472.4-201ENST00000610233 626 ntBASIC0.16□□□□□ -2.38
VCANP13611 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
VCANP13611 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
VCANP13611 RNU6-514P-201ENST00000384208 107 ntBASIC0.16□□□□□ -2.38
VCANP13611 AL117342.1-201ENST00000404861 406 ntBASIC0.16□□□□□ -2.38
VCANP13611 PDCL2P1-201ENST00000419302 352 ntBASIC0.16□□□□□ -2.38
VCANP13611 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.16□□□□□ -2.38
VCANP13611 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
VCANP13611 AP005639.2-201ENST00000527592 928 ntBASIC0.16□□□□□ -2.38
VCANP13611 AC005332.10-201ENST00000612725 619 ntBASIC0.16□□□□□ -2.38
VCANP13611 uc_338.17-201ENST00000619633 179 ntBASIC0.16□□□□□ -2.38
VCANP13611 Y_RNA.28-201ENST00000362554 111 ntBASIC0.15□□□□□ -2.38
VCANP13611 SYPL1P1-201ENST00000473622 768 ntBASIC0.15□□□□□ -2.38
VCANP13611 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.15□□□□□ -2.39
VCANP13611 RNU2-64P-201ENST00000411315 191 ntBASIC0.15□□□□□ -2.39
VCANP13611 EIF1P1-201ENST00000421436 341 ntBASIC0.15□□□□□ -2.39
VCANP13611 ERHP1-201ENST00000523006 310 ntBASIC0.15□□□□□ -2.39
VCANP13611 SNORA25.8-201ENST00000364831 128 ntBASIC0.15□□□□□ -2.39
VCANP13611 MIR635-201ENST00000384830 98 ntBASIC0.15□□□□□ -2.39
VCANP13611 MIR124-3-201ENST00000384866 87 ntBASIC0.15□□□□□ -2.39
VCANP13611 AF279873.1-201ENST00000523393 313 ntBASIC0.15□□□□□ -2.39
VCANP13611 AP003717.3-201ENST00000544832 1180 ntBASIC0.15□□□□□ -2.39
VCANP13611 MIR4667-201ENST00000578933 66 ntBASIC0.15□□□□□ -2.39
VCANP13611 BNIP3P16-201ENST00000589779 534 ntBASIC0.15□□□□□ -2.39
VCANP13611 AC015849.6-201ENST00000605454 474 ntBASIC0.15□□□□□ -2.39
VCANP13611 MIR126-201ENST00000362291 85 ntBASIC0.14□□□□□ -2.39
VCANP13611 BTF3L4P2-201ENST00000392798 346 ntBASIC0.14□□□□□ -2.39
VCANP13611 BTF3P11-201ENST00000426582 477 ntBASIC0.14□□□□□ -2.39
VCANP13611 AC074198.2-201ENST00000508153 258 ntBASIC0.14□□□□□ -2.39
VCANP13611 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.14□□□□□ -2.39
VCANP13611 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.14□□□□□ -2.39
VCANP13611 MIR3678-201ENST00000578455 94 ntBASIC0.14□□□□□ -2.39
VCANP13611 AC025449.1-201ENST00000603896 529 ntBASIC0.14□□□□□ -2.39
VCANP13611 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.14□□□□□ -2.39
VCANP13611 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
VCANP13611 PAXBP1P1-201ENST00000449315 447 ntBASIC0.14□□□□□ -2.39
VCANP13611 AC093770.1-201ENST00000511559 571 ntBASIC0.14□□□□□ -2.39
VCANP13611 MIR147B-201ENST00000390185 80 ntBASIC0.14□□□□□ -2.39
VCANP13611 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.14□□□□□ -2.39
VCANP13611 SSXP4-201ENST00000451349 245 ntBASIC0.14□□□□□ -2.39
VCANP13611 AC011406.1-201ENST00000512440 370 ntBASIC0.14□□□□□ -2.39
VCANP13611 MT-TQ-201ENST00000387372 72 ntBASIC0.13□□□□□ -2.39
VCANP13611 RPL23AP6-201ENST00000446637 472 ntBASIC0.13□□□□□ -2.39
VCANP13611 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.13□□□□□ -2.39
VCANP13611 NDUFB4P10-201ENST00000452541 359 ntBASIC0.13□□□□□ -2.39
VCANP13611 AL109918.3-201ENST00000603072 338 ntBASIC0.13□□□□□ -2.39
VCANP13611 RPS27AP8-201ENST00000452665 445 ntBASIC0.13□□□□□ -2.39
VCANP13611 EIF4EP5-201ENST00000528228 640 ntBASIC0.13□□□□□ -2.39
VCANP13611 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.13□□□□□ -2.39
VCANP13611 MIR411-201ENST00000362239 96 ntBASIC0.12□□□□□ -2.39
VCANP13611 SNORA36.1-201ENST00000363424 132 ntBASIC0.12□□□□□ -2.39
VCANP13611 RNU6-654P-201ENST00000364373 107 ntBASIC0.12□□□□□ -2.39
VCANP13611 MIR618-201ENST00000385287 98 ntBASIC0.12□□□□□ -2.39
VCANP13611 RPS26P42-201ENST00000413485 326 ntBASIC0.12□□□□□ -2.39
VCANP13611 HMGN2P30-201ENST00000423237 256 ntBASIC0.12□□□□□ -2.39
VCANP13611 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.12□□□□□ -2.39
VCANP13611 OSTCP8-201ENST00000445117 448 ntBASIC0.12□□□□□ -2.39
VCANP13611 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
VCANP13611 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.12□□□□□ -2.39
VCANP13611 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.12□□□□□ -2.39
VCANP13611 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.12□□□□□ -2.39
VCANP13611 AC021171.1-201ENST00000603137 706 ntBASIC0.12□□□□□ -2.39
VCANP13611 HSPE1P19-201ENST00000603327 295 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms