Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCNAP12004 AL139276.1-201ENST00000311910 1001 ntBASIC3.17□□□□□ -1.9
PCNAP12004 FTLP6-201ENST00000355274 422 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNU1-70P-201ENST00000362618 164 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNY3P3-201ENST00000363816 102 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNU6-270P-201ENST00000364131 105 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNU4-20P-201ENST00000365601 151 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNU6-877P-201ENST00000383868 107 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNU6-1027P-201ENST00000383998 107 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNU6-140P-201ENST00000384566 108 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNU2-29P-201ENST00000410423 189 ntBASIC3.17□□□□□ -1.9
PCNAP12004 RNU6-387P-201ENST00000411331 105 ntBASIC3.17□□□□□ -1.9
PCNAP12004 EEF1A1P40-201ENST00000412883 573 ntBASIC3.17□□□□□ -1.9
PCNAP12004 AC080125.1-201ENST00000414888 684 ntBASIC3.17□□□□□ -1.9
PCNAP12004 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCNAP12004 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.17□□□□□ -1.9
PCNAP12004 AC092047.1-201ENST00000424997 240 ntBASIC3.17□□□□□ -1.9
PCNAP12004 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.17□□□□□ -1.9
PCNAP12004 RPL36AP53-201ENST00000432891 316 ntBASIC3.17□□□□□ -1.9
PCNAP12004 DPPA3P1-201ENST00000448050 469 ntBASIC3.17□□□□□ -1.9
PCNAP12004 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.17□□□□□ -1.9
PCNAP12004 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.17□□□□□ -1.9
PCNAP12004 RNA5SP165-201ENST00000517142 115 ntBASIC3.17□□□□□ -1.9
PCNAP12004 AC245166.1-201ENST00000521012 253 ntBASIC3.17□□□□□ -1.9
PCNAP12004 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.17□□□□□ -1.9
PCNAP12004 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
PCNAP12004 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.17□□□□□ -1.9
PCNAP12004 MIR3662-201ENST00000637030 95 ntBASIC3.17□□□□□ -1.9
PCNAP12004 AC024614.3-201ENST00000637860 256 ntBASIC3.17□□□□□ -1.9
PCNAP12004 AL356274.2-201ENST00000624379 3752 ntBASIC3.17□□□□□ -1.9
PCNAP12004 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.17□□□□□ -1.9
PCNAP12004 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCNAP12004 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.17□□□□□ -1.9
PCNAP12004 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
PCNAP12004 AP003122.5-201ENST00000527668 3766 ntBASIC3.16□□□□□ -1.9
PCNAP12004 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.16□□□□□ -1.9
PCNAP12004 MTCO1P12-201ENST00000414273 1543 ntBASIC3.16□□□□□ -1.9
PCNAP12004 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
PCNAP12004 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.16□□□□□ -1.9
PCNAP12004 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.16□□□□□ -1.9
PCNAP12004 SNRPFP3-201ENST00000457792 225 ntBASIC3.16□□□□□ -1.9
PCNAP12004 RNU7-180P-201ENST00000459240 63 ntBASIC3.16□□□□□ -1.9
PCNAP12004 RN7SL293P-201ENST00000481765 281 ntBASIC3.16□□□□□ -1.9
PCNAP12004 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.16□□□□□ -1.9
PCNAP12004 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.16□□□□□ -1.9
PCNAP12004 RNU6-1038P-201ENST00000516516 104 ntBASIC3.16□□□□□ -1.9
PCNAP12004 SNORA67.7-201ENST00000516664 135 ntBASIC3.16□□□□□ -1.9
PCNAP12004 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.16□□□□□ -1.9
PCNAP12004 AC234778.2-201ENST00000566241 354 ntBASIC3.16□□□□□ -1.9
PCNAP12004 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.16□□□□□ -1.9
PCNAP12004 AC068135.2-201ENST00000569293 1028 ntBASIC3.16□□□□□ -1.9
PCNAP12004 AC010525.2-201ENST00000590920 195 ntBASIC3.16□□□□□ -1.9
PCNAP12004 AL138889.2-201ENST00000603883 242 ntBASIC3.16□□□□□ -1.9
PCNAP12004 RBM11P1-201ENST00000604951 799 ntBASIC3.16□□□□□ -1.9
PCNAP12004 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.16□□□□□ -1.9
PCNAP12004 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.16□□□□□ -1.9
PCNAP12004 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.16□□□□□ -1.9
PCNAP12004 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCNAP12004 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCNAP12004 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCNAP12004 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.15□□□□□ -1.9
PCNAP12004 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCNAP12004 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCNAP12004 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.15□□□□□ -1.9
PCNAP12004 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PCNAP12004 Z83843.1-201ENST00000604070 3685 ntBASIC3.15□□□□□ -1.91
PCNAP12004 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
PCNAP12004 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.91
PCNAP12004 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCNAP12004 AL606923.1-201ENST00000406616 190 ntBASIC3.15□□□□□ -1.91
PCNAP12004 RNA5SP38-201ENST00000410750 119 ntBASIC3.15□□□□□ -1.91
PCNAP12004 RNU4-46P-201ENST00000410818 138 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AC063979.1-201ENST00000415539 377 ntBASIC3.15□□□□□ -1.91
PCNAP12004 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.15□□□□□ -1.91
PCNAP12004 ZNF863P-201ENST00000426746 417 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.15□□□□□ -1.91
PCNAP12004 AC244505.4-201ENST00000434905 287 ntBASIC3.15□□□□□ -1.91
PCNAP12004 SSXP5-201ENST00000443473 287 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.15□□□□□ -1.91
PCNAP12004 AC115115.1-201ENST00000449927 248 ntBASIC3.15□□□□□ -1.91
PCNAP12004 RPS29P25-201ENST00000481709 171 ntBASIC3.15□□□□□ -1.91
PCNAP12004 RPL30P14-201ENST00000482744 348 ntBASIC3.15□□□□□ -1.91
PCNAP12004 CCDC34P1-201ENST00000507441 517 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.15□□□□□ -1.91
PCNAP12004 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
PCNAP12004 RNU6-143P-201ENST00000516942 93 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AL138976.2-201ENST00000563989 694 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.15□□□□□ -1.91
PCNAP12004 AL035413.2-201ENST00000604801 525 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AC245389.1-201ENST00000605141 529 ntBASIC3.15□□□□□ -1.91
PCNAP12004 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AL157817.1-201ENST00000614264 790 ntBASIC3.15□□□□□ -1.91
PCNAP12004 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AC002553.4-201ENST00000616896 331 ntBASIC3.15□□□□□ -1.91
PCNAP12004 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.15□□□□□ -1.91
PCNAP12004 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
PCNAP12004 AC091903.1-201ENST00000624322 454 ntBASIC3.15□□□□□ -1.91
PCNAP12004 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.15□□□□□ -1.91
PCNAP12004 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms