Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AP001033.2-201ENST00000609701 1003 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 MIR1264-201ENST00000616374 69 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 AL138955.1-201ENST00000622881 1040 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 AP003400.5-201ENST00000624827 617 ntBASIC1.3□□□□□ -2.2
COL1A1P02452 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
COL1A1P02452 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL1A1P02452 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
COL1A1P02452 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL1A1P02452 SNORD51.1-201ENST00000365405 77 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL1A1P02452 MIR193B-201ENST00000384907 83 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 MIR218-1-201ENST00000384999 110 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 TXNP7-201ENST00000406296 293 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 TPTE2P1-204ENST00000435256 593 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 RPL26P6-201ENST00000440913 438 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.29□□□□□ -2.2
COL1A1P02452 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.29□□□□□ -2.2
COL1A1P02452 AP1S2P1-201ENST00000457344 379 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AC108078.1-201ENST00000508073 725 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AC096745.1-201ENST00000509945 370 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.29□□□□□ -2.2
COL1A1P02452 RNA5SP337-201ENST00000517007 109 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.29□□□□□ -2.2
COL1A1P02452 AC124293.1-201ENST00000530034 493 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 OR5AL2P-201ENST00000532185 920 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AC008127.2-201ENST00000549925 1075 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.29□□□□□ -2.2
COL1A1P02452 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.29□□□□□ -2.2
COL1A1P02452 AL022067.1-201ENST00000602426 454 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AL161729.4-201ENST00000604650 476 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AC080013.4-201ENST00000607624 649 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AL355802.4-201ENST00000607635 548 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.29□□□□□ -2.2
COL1A1P02452 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL1A1P02452 AL773524.1-201ENST00000614065 229 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AP002791.1-201ENST00000623291 381 ntBASIC1.29□□□□□ -2.2
COL1A1P02452 AC007785.2-201ENST00000598627 1916 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 MIR373-201ENST00000362273 69 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 RNU5A-1-201ENST00000362698 116 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 RNA5SP62-201ENST00000363457 110 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 MIR135A2-201ENST00000384854 100 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 RNA5SP465-201ENST00000391195 109 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.28□□□□□ -2.2
COL1A1P02452 AC018630.2-202ENST00000422992 927 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 AC096920.1-201ENST00000423991 241 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.28□□□□□ -2.2
COL1A1P02452 AC079776.3-201ENST00000450665 370 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.28□□□□□ -2.2
COL1A1P02452 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL1A1P02452 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL1A1P02452 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
COL1A1P02452 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.28□□□□□ -2.2
COL1A1P02452 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.28□□□□□ -2.2
COL1A1P02452 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL1A1P02452 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.28□□□□□ -2.2
COL1A1P02452 AC233266.2-201ENST00000567067 528 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 MIR3126-201ENST00000577443 74 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.28□□□□□ -2.2
COL1A1P02452 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.28□□□□□ -2.2
COL1A1P02452 AC069294.1-201ENST00000608397 350 ntBASIC1.28□□□□□ -2.2
COL1A1P02452 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
COL1A1P02452 AC091812.1-201ENST00000432235 1948 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 RNA5SP276-201ENST00000362580 94 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 RNA5SP257-201ENST00000363023 116 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 SNORA62.1-201ENST00000364287 154 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 SNORA51.6-201ENST00000384151 125 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 HMGB1P17-201ENST00000403495 628 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 PNRC2P1-201ENST00000423940 420 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 AL596276.1-201ENST00000434465 418 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 AC093155.1-201ENST00000440164 826 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.27□□□□□ -2.21
COL1A1P02452 COX6CP18-201ENST00000448769 222 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 snoU109.1-201ENST00000459339 135 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 AL121769.1-201ENST00000469473 401 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.27□□□□□ -2.21
COL1A1P02452 AC113420.1-201ENST00000507903 571 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
COL1A1P02452 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.27□□□□□ -2.21
COL1A1P02452 MIR1273G-201ENST00000577677 100 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 BPTFP1-201ENST00000579209 492 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 AC243960.4-201ENST00000600532 288 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 GAS5-AS1-201ENST00000602767 694 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 AC211469.2-201ENST00000605461 205 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 SNORD114-21-201ENST00000606412 72 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 AC096586.1-201ENST00000610267 561 ntBASIC1.27□□□□□ -2.21
COL1A1P02452 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
COL1A1P02452 MTND5P11-201ENST00000511037 1812 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 RNU6-217P-201ENST00000384164 104 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 HMGN1P14-201ENST00000412459 517 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 EDDM3CP-201ENST00000415977 425 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 AC096649.2-201ENST00000416186 393 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.26□□□□□ -2.21
COL1A1P02452 AL591212.2-201ENST00000433923 257 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 AF213884.2-201ENST00000510417 903 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.26□□□□□ -2.21
COL1A1P02452 RNU6-551P-201ENST00000516661 103 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
COL1A1P02452 LINC00933-203ENST00000559812 219 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms