Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC012213.4-201ENST00000606457 354 ntBASIC0.78□□□□□ -2.28
POLR1AO95602 AC100821.1-201ENST00000523153 2479 ntBASIC0.78□□□□□ -2.28
POLR1AO95602 MTND5P11-201ENST00000511037 1812 ntBASIC0.78□□□□□ -2.28
POLR1AO95602 RNU6-1197P-201ENST00000391183 107 ntBASIC0.78□□□□□ -2.29
POLR1AO95602 AL035666.1-201ENST00000446195 348 ntBASIC0.78□□□□□ -2.29
POLR1AO95602 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.78□□□□□ -2.29
POLR1AO95602 RNU6-322P-201ENST00000516010 103 ntBASIC0.78□□□□□ -2.29
POLR1AO95602 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.78□□□□□ -2.29
POLR1AO95602 AP003497.1-201ENST00000528472 562 ntBASIC0.78□□□□□ -2.29
POLR1AO95602 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.78□□□□□ -2.29
POLR1AO95602 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.78□□□□□ -2.29
POLR1AO95602 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.78□□□□□ -2.29
POLR1AO95602 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
POLR1AO95602 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
POLR1AO95602 RNU6-222P-201ENST00000362438 107 ntBASIC0.77□□□□□ -2.29
POLR1AO95602 MIR618-201ENST00000385287 98 ntBASIC0.77□□□□□ -2.29
POLR1AO95602 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.77□□□□□ -2.29
POLR1AO95602 RNU2-70P-201ENST00000410718 179 ntBASIC0.77□□□□□ -2.29
POLR1AO95602 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.77□□□□□ -2.29
POLR1AO95602 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.77□□□□□ -2.29
POLR1AO95602 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.77□□□□□ -2.29
POLR1AO95602 TPTE2P6-202ENST00000445572 1007 ntBASIC0.77□□□□□ -2.29
POLR1AO95602 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.77□□□□□ -2.29
POLR1AO95602 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.77□□□□□ -2.29
POLR1AO95602 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.77□□□□□ -2.29
POLR1AO95602 AL355877.2-201ENST00000603670 358 ntBASIC0.77□□□□□ -2.29
POLR1AO95602 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.77□□□□□ -2.29
POLR1AO95602 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
POLR1AO95602 RNU6-173P-201ENST00000364215 104 ntBASIC0.76□□□□□ -2.29
POLR1AO95602 OFD1P18Y-201ENST00000420889 959 ntBASIC0.76□□□□□ -2.29
POLR1AO95602 MTCYBP3-201ENST00000445588 1137 ntBASIC0.76□□□□□ -2.29
POLR1AO95602 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.76□□□□□ -2.29
POLR1AO95602 RNU6-420P-201ENST00000458780 107 ntBASIC0.76□□□□□ -2.29
POLR1AO95602 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.76□□□□□ -2.29
POLR1AO95602 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.76□□□□□ -2.29
POLR1AO95602 AC243960.4-201ENST00000600532 288 ntBASIC0.76□□□□□ -2.29
POLR1AO95602 RNU6-418P-201ENST00000384035 107 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 MIR515-2-201ENST00000384883 83 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 MIR515-1-201ENST00000384884 83 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 AL136372.1-201ENST00000403060 228 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 AL714022.1-201ENST00000439897 151 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 AC116337.2-201ENST00000477662 156 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.75□□□□□ -2.29
POLR1AO95602 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
POLR1AO95602 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
POLR1AO95602 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.75□□□□□ -2.29
POLR1AO95602 AC010186.2-204ENST00000537668 439 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 MED28P6-201ENST00000558776 231 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.75□□□□□ -2.29
POLR1AO95602 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.75□□□□□ -2.29
POLR1AO95602 AC010329.5-201ENST00000623497 2174 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 Y_RNA.471-201ENST00000384312 102 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 VN1R42P-201ENST00000424651 344 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 RNU6-362P-201ENST00000516736 90 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 EEF1B2P4-201ENST00000551398 348 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 MIR3126-201ENST00000577443 74 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 AC068787.1-201ENST00000623908 691 ntBASIC0.75□□□□□ -2.29
POLR1AO95602 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.74□□□□□ -2.29
POLR1AO95602 RNU4-31P-201ENST00000384211 141 ntBASIC0.74□□□□□ -2.29
POLR1AO95602 AC099677.1-201ENST00000420575 175 ntBASIC0.74□□□□□ -2.29
POLR1AO95602 AL109913.1-201ENST00000421173 514 ntBASIC0.74□□□□□ -2.29
POLR1AO95602 MRPS36P1-201ENST00000421291 307 ntBASIC0.74□□□□□ -2.29
POLR1AO95602 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR1AO95602 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR1AO95602 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR1AO95602 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR1AO95602 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.74□□□□□ -2.29
POLR1AO95602 MIR6759-201ENST00000638110 65 ntBASIC0.74□□□□□ -2.29
POLR1AO95602 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.74□□□□□ -2.29
POLR1AO95602 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.73□□□□□ -2.29
POLR1AO95602 PNPLA4P1-201ENST00000458328 305 ntBASIC0.73□□□□□ -2.29
POLR1AO95602 AC107626.1-201ENST00000471084 183 ntBASIC0.73□□□□□ -2.29
POLR1AO95602 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.73□□□□□ -2.29
POLR1AO95602 AP003327.1-201ENST00000529684 127 ntBASIC0.73□□□□□ -2.29
POLR1AO95602 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.73□□□□□ -2.29
POLR1AO95602 TPTE2P4-201ENST00000258589 1605 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
POLR1AO95602 U3.13-201ENST00000364804 214 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.72□□□□□ -2.29
POLR1AO95602 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.72□□□□□ -2.29
POLR1AO95602 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.72□□□□□ -2.29
POLR1AO95602 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.72□□□□□ -2.29
POLR1AO95602 MTND4LP3-201ENST00000468320 276 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.72□□□□□ -2.29
POLR1AO95602 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
POLR1AO95602 AC022447.1-201ENST00000515358 464 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 SNORA70.16-201ENST00000516390 95 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 SNORA31.13-201ENST00000516624 135 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 RNA5SP165-201ENST00000517142 115 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.72□□□□□ -2.29
POLR1AO95602 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.72□□□□□ -2.29
POLR1AO95602 AC016925.2-201ENST00000605108 242 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 AC068276.1-201ENST00000605793 379 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.72□□□□□ -2.29
POLR1AO95602 AC092192.1-201ENST00000633154 1018 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 AP003399.1-201ENST00000637534 361 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 SNORA63.3-201ENST00000362682 132 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 RNA5SP258-201ENST00000362750 119 ntBASIC0.72□□□□□ -2.29
POLR1AO95602 RNU6-1293P-201ENST00000384077 107 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms