Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC009414.1-201ENST00000427200 443 ntBASIC3.22□□□□□ -1.89
RTN3O95197 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN3O95197 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN3O95197 WASF1P1-201ENST00000447560 1131 ntBASIC3.22□□□□□ -1.89
RTN3O95197 NANOGNBP1-201ENST00000448444 480 ntBASIC3.22□□□□□ -1.89
RTN3O95197 AC003071.1-201ENST00000451219 789 ntBASIC3.22□□□□□ -1.89
RTN3O95197 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN3O95197 RPS3AP17-201ENST00000472594 777 ntBASIC3.22□□□□□ -1.89
RTN3O95197 AC011825.1-201ENST00000484967 388 ntBASIC3.22□□□□□ -1.89
RTN3O95197 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
RTN3O95197 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.22□□□□□ -1.89
RTN3O95197 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN3O95197 RANP3-201ENST00000530970 276 ntBASIC3.22□□□□□ -1.89
RTN3O95197 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTN3O95197 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTN3O95197 SUB1P2-201ENST00000556401 297 ntBASIC3.22□□□□□ -1.89
RTN3O95197 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
RTN3O95197 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN3O95197 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.22□□□□□ -1.89
RTN3O95197 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN3O95197 AC008739.2-201ENST00000597006 317 ntBASIC3.22□□□□□ -1.89
RTN3O95197 RPL23AP78-201ENST00000599928 470 ntBASIC3.22□□□□□ -1.89
RTN3O95197 AC007938.3-201ENST00000604965 623 ntBASIC3.22□□□□□ -1.89
RTN3O95197 AC013562.2-201ENST00000611632 603 ntBASIC3.22□□□□□ -1.89
RTN3O95197 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTN3O95197 AC002064.3-201ENST00000623448 346 ntBASIC3.22□□□□□ -1.89
RTN3O95197 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTN3O95197 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.22□□□□□ -1.89
RTN3O95197 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.22□□□□□ -1.89
RTN3O95197 Y_RNA.33-201ENST00000362591 102 ntBASIC3.21□□□□□ -1.9
RTN3O95197 RNU6-395P-201ENST00000365662 106 ntBASIC3.21□□□□□ -1.9
RTN3O95197 SNORA54-201ENST00000384281 123 ntBASIC3.21□□□□□ -1.9
RTN3O95197 Y_RNA.500-201ENST00000384466 111 ntBASIC3.21□□□□□ -1.9
RTN3O95197 MIR454-201ENST00000390180 115 ntBASIC3.21□□□□□ -1.9
RTN3O95197 CISD1P1-201ENST00000393907 327 ntBASIC3.21□□□□□ -1.9
RTN3O95197 RNU6-1025P-201ENST00000410629 104 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AC023141.4-201ENST00000412031 328 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN3O95197 ATG3P1-201ENST00000419507 911 ntBASIC3.21□□□□□ -1.9
RTN3O95197 RPL35AP12-201ENST00000425362 338 ntBASIC3.21□□□□□ -1.9
RTN3O95197 CALM2P2-201ENST00000428512 440 ntBASIC3.21□□□□□ -1.9
RTN3O95197 SAR1AP4-201ENST00000429225 591 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AC236972.1-201ENST00000433225 199 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN3O95197 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN3O95197 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN3O95197 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN3O95197 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN3O95197 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN3O95197 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.21□□□□□ -1.9
RTN3O95197 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN3O95197 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN3O95197 AC009812.2-201ENST00000517657 457 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AC009902.1-201ENST00000519351 183 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.21□□□□□ -1.9
RTN3O95197 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN3O95197 OR4R1P-201ENST00000529879 463 ntBASIC3.21□□□□□ -1.9
RTN3O95197 OR5AL2P-201ENST00000532185 920 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AC022080.3-201ENST00000544433 482 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN3O95197 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.21□□□□□ -1.9
RTN3O95197 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.21□□□□□ -1.9
RTN3O95197 MTCO3P13-201ENST00000577757 781 ntBASIC3.21□□□□□ -1.9
RTN3O95197 MTND1P15-201ENST00000579262 949 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AC008521.1-201ENST00000587471 187 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AC012119.1-201ENST00000603184 222 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AL355877.2-201ENST00000603670 358 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AL022154.1-201ENST00000604698 785 ntBASIC3.21□□□□□ -1.9
RTN3O95197 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.21□□□□□ -1.9
RTN3O95197 NDUFA8P1-201ENST00000605525 367 ntBASIC3.21□□□□□ -1.9
RTN3O95197 AC093732.2-201ENST00000607950 274 ntBASIC3.21□□□□□ -1.9
RTN3O95197 UCA1.1-201ENST00000620952 75 ntBASIC3.21□□□□□ -1.9
RTN3O95197 U6.114-201ENST00000636407 96 ntBASIC3.21□□□□□ -1.9
RTN3O95197 U6.99-201ENST00000637524 83 ntBASIC3.21□□□□□ -1.9
RTN3O95197 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RTN3O95197 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RTN3O95197 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RTN3O95197 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RTN3O95197 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.2□□□□□ -1.9
RTN3O95197 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.2□□□□□ -1.9
RTN3O95197 ZNF519P1-201ENST00000449011 1626 ntBASIC3.2□□□□□ -1.9
RTN3O95197 Y_RNA.194-201ENST00000363985 102 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RTN3O95197 Y_RNA.559-201ENST00000384686 107 ntBASIC3.2□□□□□ -1.9
RTN3O95197 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN3O95197 AC016907.1-201ENST00000419483 435 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AL160275.3-201ENST00000423876 471 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.2□□□□□ -1.9
RTN3O95197 RPS12P18-201ENST00000442381 270 ntBASIC3.2□□□□□ -1.9
RTN3O95197 RBBP4P6-201ENST00000508098 202 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN3O95197 AC098799.2-201ENST00000509466 868 ntBASIC3.2□□□□□ -1.9
RTN3O95197 RNU6-685P-201ENST00000517088 95 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN3O95197 AC025755.1-201ENST00000521306 278 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN3O95197 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.2□□□□□ -1.9
RTN3O95197 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.2□□□□□ -1.9
RTN3O95197 AC091805.2-201ENST00000603848 235 ntBASIC3.2□□□□□ -1.9
RTN3O95197 AL035413.2-201ENST00000604801 525 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms