Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 USP9YP17-201ENST00000444617 696 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.72□□□□□ -2.13
UPK1BO75841 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.72□□□□□ -2.13
UPK1BO75841 MTND1P3-201ENST00000484956 952 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 AC023194.1-201ENST00000493084 308 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 AC104685.1-201ENST00000502445 371 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 AC091951.3-201ENST00000504093 246 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 FAM92A1P2-202ENST00000504766 877 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 AC068587.4-201ENST00000533893 186 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 RPS3AP4-201ENST00000555161 764 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.72□□□□□ -2.13
UPK1BO75841 LINC00933-203ENST00000559812 219 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 MIR3126-201ENST00000577443 74 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.72□□□□□ -2.13
UPK1BO75841 AC108747.1-201ENST00000609508 535 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
UPK1BO75841 U4atac.1-201ENST00000618345 95 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 AC010608.3-201ENST00000625048 527 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 AC103706.2-201ENST00000638080 240 ntBASIC1.72□□□□□ -2.13
UPK1BO75841 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UPK1BO75841 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UPK1BO75841 MTND4P9-201ENST00000507819 1346 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UPK1BO75841 RNY3P13-201ENST00000365542 102 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 SMIM11P1-201ENST00000369586 178 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 RNU6-906P-201ENST00000384700 70 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
UPK1BO75841 SNORA48.7-201ENST00000391302 135 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.71□□□□□ -2.14
UPK1BO75841 ELOCP17-201ENST00000414751 326 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 EDDM3CP-201ENST00000415977 425 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 RAC1P6-201ENST00000423911 575 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AC092017.2-201ENST00000427600 362 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1BO75841 AC016691.1-201ENST00000441321 413 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.71□□□□□ -2.14
UPK1BO75841 AC104978.1-201ENST00000449387 391 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AL009048.1-201ENST00000450437 298 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.71□□□□□ -2.14
UPK1BO75841 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1BO75841 AL049829.1-201ENST00000465411 156 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 HSPE1P23-201ENST00000509838 286 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 SNORA31.19-201ENST00000517079 126 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1BO75841 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
UPK1BO75841 AC023050.2-201ENST00000544968 387 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1BO75841 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1BO75841 AC012435.1-202ENST00000568772 240 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.71□□□□□ -2.14
UPK1BO75841 KC877982.1-201ENST00000602313 470 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AP000860.1-201ENST00000605250 559 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AC093732.2-201ENST00000607950 274 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AC106052.1-201ENST00000608029 497 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 MIR5739-201ENST00000619803 80 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AC091932.3-201ENST00000624223 323 ntBASIC1.71□□□□□ -2.14
UPK1BO75841 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.71□□□□□ -2.14
UPK1BO75841 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.71□□□□□ -2.14
UPK1BO75841 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
UPK1BO75841 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
UPK1BO75841 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
UPK1BO75841 Y_RNA.46-201ENST00000362695 102 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 SNORA4.3-201ENST00000365564 137 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 MIR17-201ENST00000385012 84 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 RNU6-817P-201ENST00000391083 104 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC092809.3-201ENST00000415453 231 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1BO75841 RPS24P7-201ENST00000416921 246 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AL160275.3-201ENST00000423876 471 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1BO75841 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1BO75841 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.7□□□□□ -2.14
UPK1BO75841 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1BO75841 AL353706.1-201ENST00000436728 494 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.7□□□□□ -2.14
UPK1BO75841 AC009238.1-201ENST00000442165 424 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1BO75841 AC009237.6-201ENST00000446969 424 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 PSPHP1-201ENST00000450062 261 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 BTF3P15-201ENST00000455606 336 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1BO75841 MTCO1P42-201ENST00000457379 726 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AL672167.3-201ENST00000465951 960 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.7□□□□□ -2.14
UPK1BO75841 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
UPK1BO75841 SNORA4.4-201ENST00000515921 135 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 RNU2-19P-201ENST00000517288 84 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC087276.1-201ENST00000529659 480 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UPK1BO75841 AC079598.5-201ENST00000547460 117 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC123904.2-201ENST00000548059 300 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.7□□□□□ -2.14
UPK1BO75841 MIR3146-201ENST00000580367 79 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
UPK1BO75841 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.7□□□□□ -2.14
UPK1BO75841 MIR4325-201ENST00000583049 90 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC010928.2-201ENST00000588017 287 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 ELOCP29-201ENST00000588193 334 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC007229.1-201ENST00000590455 412 ntBASIC1.7□□□□□ -2.14
UPK1BO75841 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms