Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC008121.3-201ENST00000618726 433 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC040168.1-201ENST00000623594 991 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AL138713.1-201ENST00000624026 2130 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AC007496.3-201ENST00000624987 3443 ntBASIC3.36□□□□□ -1.87
SMAD6O43541 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMAD6O43541 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMAD6O43541 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SMAD6O43541 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
SMAD6O43541 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMAD6O43541 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.35□□□□□ -1.87
SMAD6O43541 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.35□□□□□ -1.87
SMAD6O43541 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.35□□□□□ -1.87
SMAD6O43541 MIR30E-201ENST00000362104 92 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 RNU6-641P-201ENST00000384006 107 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 SNORA9-201ENST00000384215 133 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 RNU6-1297P-201ENST00000384415 104 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AL606923.1-201ENST00000406616 190 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 RPL5P18-201ENST00000406671 891 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 RNU2-15P-201ENST00000410692 191 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 RNU4-14P-201ENST00000410858 122 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 YPEL5P1-201ENST00000419731 367 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 Z82205.1-201ENST00000428456 297 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 RPS3AP52-201ENST00000435639 297 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 HMGB3P11-201ENST00000440127 604 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.35□□□□□ -1.87
SMAD6O43541 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.35□□□□□ -1.87
SMAD6O43541 AL118520.1-201ENST00000450770 291 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AL353691.1-201ENST00000451332 387 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 RNU7-182P-201ENST00000459009 62 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 Y_RNA.631-201ENST00000459607 101 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.35□□□□□ -1.87
SMAD6O43541 AC130509.1-201ENST00000464158 433 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 RPL23AP67-201ENST00000465341 474 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.35□□□□□ -1.87
SMAD6O43541 RN7SL807P-201ENST00000470923 297 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 RPL7P5-201ENST00000471472 736 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SMAD6O43541 AC116562.3-201ENST00000506136 177 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.35□□□□□ -1.87
SMAD6O43541 RNU6-1038P-201ENST00000516516 104 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 Y_RNA.718-201ENST00000517110 102 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AC107934.2-201ENST00000518653 310 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.35□□□□□ -1.87
SMAD6O43541 AP001804.3-201ENST00000525146 880 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AC068587.5-201ENST00000528506 175 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 MIR5195-201ENST00000583555 115 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 MIR4424-201ENST00000585257 86 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.35□□□□□ -1.87
SMAD6O43541 YPEL5P2-201ENST00000605553 359 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.35□□□□□ -1.87
SMAD6O43541 AL590099.1-201ENST00000615276 138 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AC084781.2-201ENST00000615568 161 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.35□□□□□ -1.87
SMAD6O43541 AL359757.2-201ENST00000624309 274 ntBASIC3.35□□□□□ -1.87
SMAD6O43541 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.35□□□□□ -1.87
SMAD6O43541 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SMAD6O43541 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.35□□□□□ -1.87
SMAD6O43541 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMAD6O43541 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SMAD6O43541 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 AL139276.1-201ENST00000311910 1001 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 RNU6-511P-201ENST00000363496 107 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 Y_RNA.202-201ENST00000364083 110 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 SNORA33.2-201ENST00000365413 134 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 RNU6-1029P-201ENST00000384109 107 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SMAD6O43541 AL359634.1-202ENST00000404721 284 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 RPL7P46-201ENST00000425129 740 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 RPL23AP82-202ENST00000427528 469 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 OR2AS1P-201ENST00000427827 319 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 PRPS1P1-201ENST00000445305 876 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 SNORD121B-201ENST00000458838 81 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 RNU7-180P-201ENST00000459240 63 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 CENPBD1P1-201ENST00000464061 469 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.34□□□□□ -1.87
SMAD6O43541 AC090096.1-201ENST00000489168 390 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 AC091885.1-201ENST00000506658 268 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
SMAD6O43541 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 RNU6-798P-201ENST00000516912 103 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 Y_RNA.711-201ENST00000516993 102 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.34□□□□□ -1.87
SMAD6O43541 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.34□□□□□ -1.87
SMAD6O43541 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 AL118558.2-201ENST00000556294 238 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 TGIF1P1-201ENST00000558095 802 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.34□□□□□ -1.87
SMAD6O43541 MIR5680-201ENST00000577577 84 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 MIR3200-201ENST00000580767 85 ntBASIC3.34□□□□□ -1.87
SMAD6O43541 SNORD84-203ENST00000584275 78 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms