Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC013412.1-201ENST00000610687 192 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 FRG1KP-201ENST00000623592 341 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 AL512643.1-201ENST00000635735 524 ntBASIC2.44□□□□□ -2.02
CLDN3O15551 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN3O15551 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLDN3O15551 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.44□□□□□ -2.02
CLDN3O15551 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.44□□□□□ -2.02
CLDN3O15551 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.43□□□□□ -2.02
CLDN3O15551 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN3O15551 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN3O15551 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN3O15551 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CLDN3O15551 RNU1-52P-201ENST00000384190 164 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 RNU6-817P-201ENST00000391083 104 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 RPS12P24-201ENST00000412619 387 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 USP9YP6-201ENST00000413550 854 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN3O15551 CYCSP48-201ENST00000417124 323 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN3O15551 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN3O15551 BX276092.3-201ENST00000424182 230 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 RPL30P4-201ENST00000429309 333 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.43□□□□□ -2.02
CLDN3O15551 MICF-203ENST00000432679 129 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 UBE2D3P1-201ENST00000436669 444 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 AL139109.1-201ENST00000455491 297 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 MTND1P3-201ENST00000484956 952 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 ANXA2P1-201ENST00000505539 926 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN3O15551 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN3O15551 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.43□□□□□ -2.02
CLDN3O15551 RNU6-1183P-201ENST00000517054 60 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 RNU6-1003P-201ENST00000517099 105 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 ROCK1P1-201ENST00000573767 549 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 AP000811.1-201ENST00000603803 651 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 AL358072.1-201ENST00000604156 575 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 AC121334.2-201ENST00000605387 271 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 AC107952.2-201ENST00000606048 486 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 AC069294.1-201ENST00000608397 350 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 uc_338.14-201ENST00000613162 166 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 AC006338.1-201ENST00000618453 749 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 MIR6873-201ENST00000622788 63 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 Z99571.1-201ENST00000636677 394 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN3O15551 AL359854.1-201ENST00000614203 1594 ntBASIC2.43□□□□□ -2.02
CLDN3O15551 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLDN3O15551 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
CLDN3O15551 AC092104.1-201ENST00000497346 1441 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 FCF1P10-201ENST00000407590 479 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 RNU2-36P-201ENST00000410361 191 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 AF274854.1-201ENST00000413236 615 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN3O15551 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN3O15551 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.42□□□□□ -2.02
CLDN3O15551 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN3O15551 AL353705.4-201ENST00000449661 238 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 AL441985.1-201ENST00000457727 251 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 AP001324.2-201ENST00000461163 319 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 ARL2BPP2-201ENST00000550907 489 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.42□□□□□ -2.02
CLDN3O15551 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.42□□□□□ -2.02
CLDN3O15551 MYL12BP1-201ENST00000569826 507 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 MIR1273D-201ENST00000577266 86 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 MIR4782-201ENST00000577987 79 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 AC104763.2-201ENST00000604179 382 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 uc_338.12-201ENST00000616344 181 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 AC009831.4-201ENST00000620744 325 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CLDN3O15551 AC104454.1-201ENST00000421341 1401 ntBASIC2.42□□□□□ -2.02
CLDN3O15551 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLDN3O15551 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN3O15551 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN3O15551 AL391994.1-201ENST00000254724 282 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN3O15551 Y_RNA.97-201ENST00000363094 102 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 RNY4P16-201ENST00000364768 94 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 RN7SKP223-201ENST00000410582 62 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AC006366.1-201ENST00000422002 759 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 DPH3P2-201ENST00000422618 250 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 RPS27AP14-201ENST00000422868 454 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AC093106.2-201ENST00000428212 385 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AL139415.2-201ENST00000431968 163 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN3O15551 RPL37P21-201ENST00000435890 276 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.41□□□□□ -2.02
CLDN3O15551 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.41□□□□□ -2.02
CLDN3O15551 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN3O15551 RN7SL429P-201ENST00000479090 223 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 RN7SL489P-201ENST00000486185 223 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 RN7SL327P-201ENST00000488659 223 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLDN3O15551 HMGB3P3-201ENST00000510526 400 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.41□□□□□ -2.02
CLDN3O15551 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.41□□□□□ -2.02
CLDN3O15551 RNA5SP112-201ENST00000515937 99 ntBASIC2.41□□□□□ -2.02
CLDN3O15551 RNA5SP200-201ENST00000516360 103 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms