Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL109918.3-201ENST00000603072 338 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 AC021171.1-201ENST00000603137 706 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 AL357094.1-201ENST00000603845 844 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.54□□□□□ -2.16
UBFD1O14562 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UBFD1O14562 ZNF876P-202ENST00000398732 1485 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 AL079343.1-201ENST00000572358 1771 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBFD1O14562 RNU6-457P-201ENST00000363999 107 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 RNU6-289P-201ENST00000364093 107 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 RNU6-224P-201ENST00000384055 107 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL356421.1-201ENST00000403255 413 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 RNU2-72P-201ENST00000411175 163 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 RNA5SP270-201ENST00000411361 118 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 MTND4P3-201ENST00000417829 541 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.53□□□□□ -2.16
UBFD1O14562 BX510359.4-201ENST00000423750 193 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL353729.1-201ENST00000425044 720 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 RPL30P4-201ENST00000429309 333 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.53□□□□□ -2.16
UBFD1O14562 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.53□□□□□ -2.16
UBFD1O14562 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.53□□□□□ -2.16
UBFD1O14562 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.53□□□□□ -2.16
UBFD1O14562 MTND4P23-201ENST00000447723 1363 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.53□□□□□ -2.16
UBFD1O14562 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
UBFD1O14562 PMCHL2-203ENST00000457791 237 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 RPL7P18-201ENST00000478965 734 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL160314.1-201ENST00000490836 438 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.53□□□□□ -2.16
UBFD1O14562 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.53□□□□□ -2.16
UBFD1O14562 RNA5SP290-201ENST00000517133 127 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.53□□□□□ -2.16
UBFD1O14562 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.53□□□□□ -2.16
UBFD1O14562 DEFB131D-201ENST00000526803 184 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.53□□□□□ -2.16
UBFD1O14562 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
UBFD1O14562 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.53□□□□□ -2.16
UBFD1O14562 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.53□□□□□ -2.16
UBFD1O14562 CYCSP2-201ENST00000558168 301 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC110491.1-201ENST00000562191 2010 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.53□□□□□ -2.16
UBFD1O14562 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
UBFD1O14562 MTND3P13-201ENST00000574391 343 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC024619.4-201ENST00000580924 316 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.53□□□□□ -2.16
UBFD1O14562 AF038458.1-201ENST00000588406 262 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.53□□□□□ -2.16
UBFD1O14562 AL391813.1-201ENST00000603098 260 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.6-201ENST00000603753 252 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.11-201ENST00000604059 253 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.10-201ENST00000604330 253 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC008162.1-201ENST00000604718 254 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.1-201ENST00000604752 252 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL355297.2-201ENST00000604792 129 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.2-201ENST00000604983 252 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.5-201ENST00000605253 252 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.4-201ENST00000605279 254 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.12-201ENST00000605291 253 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.8-201ENST00000605353 252 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.9-201ENST00000605428 253 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL670379.7-201ENST00000605823 252 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AL121652.1-201ENST00000608851 448 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC107308.1-201ENST00000615897 301 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.53□□□□□ -2.16
UBFD1O14562 MIR4275-201ENST00000636486 87 ntBASIC1.53□□□□□ -2.16
UBFD1O14562 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
UBFD1O14562 AC011477.1-204ENST00000623416 1325 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 RNY1P10-201ENST00000363268 113 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 RNU6-777P-201ENST00000364265 104 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 RNU6-1083P-201ENST00000384022 107 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 U8.14-201ENST00000390843 143 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AL590084.2-201ENST00000401481 382 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AL590084.1-201ENST00000407885 387 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AC096649.2-201ENST00000416186 393 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 BTF3P4-201ENST00000418852 495 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.52□□□□□ -2.17
UBFD1O14562 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.52□□□□□ -2.17
UBFD1O14562 ELOCP14-201ENST00000428070 331 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.52□□□□□ -2.17
UBFD1O14562 MICF-203ENST00000432679 129 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 MTND1P28-201ENST00000435623 950 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.52□□□□□ -2.17
UBFD1O14562 ELOCP7-201ENST00000439968 331 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AC098831.1-201ENST00000440661 216 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AC092473.1-201ENST00000441098 221 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.52□□□□□ -2.17
UBFD1O14562 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.52□□□□□ -2.17
UBFD1O14562 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBFD1O14562 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.52□□□□□ -2.17
UBFD1O14562 SCARNA3-201ENST00000517097 143 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.52□□□□□ -2.17
UBFD1O14562 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.52□□□□□ -2.17
UBFD1O14562 AC023538.1-201ENST00000534576 736 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 AC005832.3-201ENST00000537929 631 ntBASIC1.52□□□□□ -2.17
UBFD1O14562 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.52□□□□□ -2.17
UBFD1O14562 AC007151.1-201ENST00000572774 483 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 250.6 ms