Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC022878.1-201ENST00000530684 149 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR3921-201ENST00000577308 85 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR3146-201ENST00000580367 79 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 HMGN1P30-201ENST00000589286 268 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC007038.2-201ENST00000608095 740 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC103710.2-201ENST00000609912 942 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC091304.9-201ENST00000612091 226 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC025594.3-201ENST00000613068 790 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC009878.1-201ENST00000621819 340 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL136313.1-201ENST00000624804 202 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 MTND5P6-201ENST00000422338 1798 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 SNORD116-2-201ENST00000384274 95 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 SNORD116-6-201ENST00000384711 96 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL109755.1-201ENST00000401791 649 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR1302-8-201ENST00000408342 128 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 Z85995.1-201ENST00000415547 335 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 UBE2FP1-201ENST00000416536 447 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 MED14P1-201ENST00000430517 648 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 NDUFB4P6-201ENST00000436819 366 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 MTCO3P45-201ENST00000443036 613 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL592447.1-201ENST00000447592 540 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC010631.1-201ENST00000474150 156 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC116337.2-201ENST00000477662 156 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC104435.1-201ENST00000483483 166 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 MTND4LP18-201ENST00000526864 291 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AP000907.2-201ENST00000530827 353 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC103810.1-201ENST00000579873 453 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC009977.1-201ENST00000586015 570 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC112191.3-201ENST00000604371 277 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL451064.1-201ENST00000607718 471 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC012360.2-201ENST00000609349 391 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR6840-201ENST00000611937 71 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 ZNF72P-201ENST00000425869 1908 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.17□□□□□ -2.06
TMX2-CTNND1H3BSU7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC008669.1-201ENST00000565823 2178 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 OR4G2P-202ENST00000641004 1759 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-511P-201ENST00000363496 107 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU5A-8P-201ENST00000364102 114 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-432P-201ENST00000384196 109 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-248P-201ENST00000410720 107 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 RPL17P12-201ENST00000413391 526 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 RPL27AP8-201ENST00000424277 446 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL589872.1-201ENST00000426602 288 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL591806.2-201ENST00000433122 173 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 TAAR7P-201ENST00000436141 242 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 RPL35AP22-201ENST00000436855 335 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU7-59P-201ENST00000459101 61 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC112204.1-201ENST00000502591 103 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC117532.1-201ENST00000514638 323 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 SCARNA15.2-201ENST00000516409 127 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU2-46P-201ENST00000517038 113 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AP000889.2-201ENST00000532684 490 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC007115.1-201ENST00000546853 234 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC068790.3-201ENST00000602988 553 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL356280.1-201ENST00000603614 379 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL358072.1-201ENST00000604156 575 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 HSPE1P7-201ENST00000604681 321 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 uc_338.12-201ENST00000616344 181 ntBASIC2.16□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC009509.4-201ENST00000619202 509 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms