Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC078795.2-201ENST00000602835 1252 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC013553.2-201ENST00000604244 589 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AL022154.1-201ENST00000604698 785 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 MIR6817-201ENST00000615588 66 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 Y_RNA.22-201ENST00000362492 102 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 RNU6-511P-201ENST00000363496 107 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 RNA5SP68-201ENST00000363885 119 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 MIR325-201ENST00000385260 98 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AL591416.1-201ENST00000404015 867 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 RPL21P24-201ENST00000413752 448 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC092809.3-201ENST00000415453 231 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 C1DP2-201ENST00000418167 426 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC018634.1-201ENST00000437554 401 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AL451074.3-201ENST00000437709 472 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 SNRPGP6-201ENST00000451124 220 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 RPS3P1-201ENST00000456781 192 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 RN7SL432P-201ENST00000484057 298 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC234781.5-201ENST00000508429 271 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 MTND3P5-201ENST00000512798 333 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 Y_RNA.672-201ENST00000516289 104 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 RNU6-1256P-201ENST00000516539 103 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 CASP1P1-201ENST00000526345 212 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 DEFB108A-201ENST00000530110 222 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AP000867.2-201ENST00000532468 320 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC024909.2-201ENST00000553035 286 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC137800.2-201ENST00000574375 120 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 MIR5194-201ENST00000582634 120 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 MIR5007-201ENST00000583098 95 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AF038458.1-201ENST00000588406 262 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC008739.2-201ENST00000597006 317 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AL121992.2-201ENST00000606262 256 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AL139286.2-201ENST00000606838 396 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 AC110079.1-202ENST00000635213 138 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 OR5H6-203ENST00000642105 978 ntBASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TRIM49D1C9J1S8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 CKAP2P1-201ENST00000555477 2049 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 MIR627-201ENST00000384979 97 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 MIR514A1-201ENST00000385133 98 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AL359634.1-202ENST00000404721 284 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 USP9YP27-201ENST00000418455 438 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC010975.2-201ENST00000427781 588 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 WARS2P1-201ENST00000429678 537 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC092573.2-201ENST00000434546 243 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 MTCO3P45-201ENST00000443036 613 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AL033528.1-201ENST00000453780 140 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 RBM43P1-201ENST00000476891 1081 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 HSPE1P6-201ENST00000479457 291 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AL135752.1-201ENST00000479477 471 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC138853.1-201ENST00000503549 823 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 RPL23AP94-201ENST00000512518 302 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC022483.1-201ENST00000514020 567 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 RNA5SP471-201ENST00000516971 106 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC079089.3-201ENST00000603094 673 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 uc_338.12-201ENST00000616344 181 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 MIR6130-201ENST00000619419 109 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 AL136360.1-201ENST00000503377 1900 ntBASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TRIM49D1C9J1S8 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 RN7SKP226-201ENST00000364912 300 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 RNU6-169P-201ENST00000365336 107 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 SMIM11P1-201ENST00000369586 178 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 RNU6-701P-201ENST00000384059 107 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms