Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 ELOCP26-201ENST00000436067 329 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 MTCYBP34-201ENST00000439552 670 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC009296.1-201ENST00000443146 155 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC004223.1-201ENST00000479840 271 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC006499.2-201ENST00000513470 337 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 RN7SKP265-201ENST00000516448 223 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 RN7SKP258-201ENST00000517151 304 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC068587.4-201ENST00000533893 186 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC087897.1-201ENST00000550134 156 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 MIR1273G-201ENST00000577677 100 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC112220.2-201ENST00000605513 533 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC096772.1-201ENST00000609146 564 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AP000240.1-201ENST00000609910 452 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AL596245.1-201ENST00000618994 362 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AP000676.3-201ENST00000623299 569 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 LINC02211-204ENST00000642024 1070 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 SNORD48-201ENST00000364953 64 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 SNORA6-201ENST00000384033 151 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 RNU6-432P-201ENST00000384196 109 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 MIR17-201ENST00000385012 84 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 U3.29-201ENST00000391296 212 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 MTCYBP38-201ENST00000417160 1123 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 USP9YP26-201ENST00000421008 661 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC099548.1-201ENST00000421443 426 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AL953862.1-201ENST00000423016 168 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 RPL27AP8-201ENST00000424277 446 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC233728.2-201ENST00000425348 757 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AL358794.1-201ENST00000445689 381 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 HSPE1P23-201ENST00000509838 286 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 TPT1P8-201ENST00000510120 555 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC105914.1-201ENST00000511798 226 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC024589.1-201ENST00000512207 263 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC022483.1-201ENST00000514020 567 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 RNU6-1282P-201ENST00000516735 96 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 MIR514B-201ENST00000516774 80 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC090502.2-201ENST00000549267 280 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 SUB1P4-201ENST00000566062 339 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 VN1R83P-201ENST00000595685 445 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 BNIP3P26-201ENST00000600827 554 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC024060.1-201ENST00000607052 494 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AP003122.6-201ENST00000623831 495 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC099654.8-201ENST00000637757 681 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC092447.10-201ENST00000620607 1652 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 RNU4-28P-201ENST00000364739 141 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 SNORA70.7-201ENST00000384159 133 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 SNORD116-23-201ENST00000384645 92 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 SNORA40.2-201ENST00000390847 128 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 HMGB1P17-201ENST00000403495 628 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 RNA5SP56-201ENST00000410277 118 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 GTF2IP3-201ENST00000433887 494 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC007327.1-201ENST00000447461 264 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 ZNF886P-201ENST00000450781 723 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 RNU7-136P-201ENST00000458819 69 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 RPL23AP41-201ENST00000484754 458 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC096751.1-202ENST00000502691 1067 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC108078.1-201ENST00000508073 725 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC114786.4-201ENST00000508771 728 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC113347.3-201ENST00000509113 148 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC114797.1-201ENST00000514003 728 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 SNORA19.3-201ENST00000516165 130 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AP001189.2-201ENST00000527320 189 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AC087481.2-201ENST00000565492 330 ntBASIC1.14□□□□□ -2.23
COL6A6A6NMZ7 AP000254.1-201ENST00000609934 520 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms