Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.18□□□□□ -2.38
LINC01549A6NIU2 AC139712.2-201ENST00000424302 339 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.18□□□□□ -2.38
LINC01549A6NIU2 MTCO2P20-201ENST00000437339 673 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 SNRPFP3-201ENST00000457792 225 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 AP002371.1-201ENST00000463604 433 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 HMGN1P7-201ENST00000491722 313 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 RNU6-1282P-201ENST00000516735 96 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 RN7SKP96-201ENST00000516948 297 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.18□□□□□ -2.38
LINC01549A6NIU2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC0.18□□□□□ -2.38
LINC01549A6NIU2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.18□□□□□ -2.38
LINC01549A6NIU2 MIR4504-201ENST00000577413 92 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 AC009509.4-201ENST00000619202 509 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 MTND2P41-201ENST00000637599 773 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 SNORD1A-201ENST00000364968 72 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 RNA5SP240-201ENST00000365355 128 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 PRRC2CP1-201ENST00000404428 159 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 RNU2-49P-201ENST00000410666 184 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 RNA5SP501-201ENST00000410990 112 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 C1DP1-201ENST00000426049 402 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 RPS15AP5-201ENST00000436276 388 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AC244505.5-201ENST00000443639 207 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 FCF1P6-201ENST00000456841 595 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 RNU6-1004P-201ENST00000516584 111 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 RNU6-229P-201ENST00000516614 102 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AC015712.3-201ENST00000559380 164 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 MIR5093-201ENST00000583199 100 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 FAM60CP-201ENST00000591086 664 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AC079791.1-201ENST00000605356 973 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 snoU13.31-201ENST00000607291 104 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AC008498.1-201ENST00000613012 531 ntBASIC0.17□□□□□ -2.38
LINC01549A6NIU2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.17□□□□□ -2.38
LINC01549A6NIU2 SNORD114-27-201ENST00000363766 70 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 RNU6-1032P-201ENST00000384100 107 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 SNORA25-201ENST00000384384 134 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.16□□□□□ -2.38
LINC01549A6NIU2 AL049714.1-201ENST00000466686 347 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.16□□□□□ -2.38
LINC01549A6NIU2 AL163195.1-201ENST00000496941 348 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.16□□□□□ -2.38
LINC01549A6NIU2 NRON-201ENST00000517270 370 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.16□□□□□ -2.38
LINC01549A6NIU2 OR5AK1P-201ENST00000524837 922 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 APOOP3-201ENST00000536787 586 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.16□□□□□ -2.38
LINC01549A6NIU2 AC104763.2-201ENST00000604179 382 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 AC040896.1-201ENST00000613819 479 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 AL359314.1-201ENST00000616913 261 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.16□□□□□ -2.38
LINC01549A6NIU2 DDX43P2-201ENST00000604753 1354 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 ELL2P3-201ENST00000457883 1602 ntBASIC0.16□□□□□ -2.38
LINC01549A6NIU2 SNORA25B-201ENST00000365507 128 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 RNU6-185P-201ENST00000384421 107 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 NDUFB4P7-201ENST00000423198 363 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 MTND1P18-201ENST00000448191 573 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 HSPE1P13-201ENST00000451143 297 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 USP9YP34-201ENST00000453983 808 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 MRPS17P3-201ENST00000465453 385 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 SNORA26.10-201ENST00000516427 141 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 SNORA31.22-201ENST00000517204 135 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 AC092470.1-201ENST00000546187 132 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 LINC00557-201ENST00000563184 1279 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 CYP3A52P-201ENST00000563326 91 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 AL359821.1-201ENST00000605519 182 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 OR4G3P-201ENST00000633500 913 ntBASIC0.15□□□□□ -2.39
LINC01549A6NIU2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
LINC01549A6NIU2 MIR605-201ENST00000385078 83 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 FGF7P8-201ENST00000402994 292 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 RPS15AP12-201ENST00000419498 388 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AL512844.2-201ENST00000433990 593 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 DDX3P2-201ENST00000446138 111 ntBASIC0.14□□□□□ -2.39
LINC01549A6NIU2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.14□□□□□ -2.39
LINC01549A6NIU2 RNA5SP134-201ENST00000516492 96 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms