Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AL118508.4-201ENST00000624142 1176 ntBASIC0.08□□□□□ -2.4
LINC01546A6NGU7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
LINC01546A6NGU7 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.08□□□□□ -2.4
LINC01546A6NGU7 AL513185.3-201ENST00000433335 1300 ntBASIC0.08□□□□□ -2.4
LINC01546A6NGU7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 RNU6-349P-201ENST00000362402 107 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 RNU6-1083P-201ENST00000384022 107 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 VN1R42P-201ENST00000424651 344 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 RPS27P16-201ENST00000425758 201 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 RPL36AP53-201ENST00000432891 316 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AC092573.2-201ENST00000434546 243 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 ARL5AP3-201ENST00000439327 386 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 RPS29P1-201ENST00000465274 159 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 TRBVA-201ENST00000498804 316 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AC067942.3-201ENST00000512025 362 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 RNU6-496P-201ENST00000516145 99 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AL590705.4-201ENST00000532209 134 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AC136443.5-201ENST00000603741 370 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.07□□□□□ -2.4
LINC01546A6NGU7 AL138726.1-201ENST00000614873 333 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 ZNF680P1-201ENST00000436625 1469 ntBASIC0.07□□□□□ -2.4
LINC01546A6NGU7 U3.9-201ENST00000363823 204 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
LINC01546A6NGU7 RPS15AP38-201ENST00000413110 372 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01546A6NGU7 RPS15AP17-201ENST00000470598 390 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.06□□□□□ -2.4
LINC01546A6NGU7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 NRON-201ENST00000517270 370 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01546A6NGU7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01546A6NGU7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.06□□□□□ -2.4
LINC01546A6NGU7 AC012435.1-202ENST00000568772 240 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01546A6NGU7 BX284668.6-201ENST00000606899 438 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 AC040896.1-201ENST00000613819 479 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 MIR8065-201ENST00000620577 100 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 MIR6513-201ENST00000621188 64 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 AL359757.2-201ENST00000624309 274 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.06□□□□□ -2.4
LINC01546A6NGU7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
LINC01546A6NGU7 MTND4P14-201ENST00000435799 1354 ntBASIC0.06□□□□□ -2.4
LINC01546A6NGU7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 RNU6-707P-201ENST00000364647 95 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 MIR605-201ENST00000385078 83 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 UBE2V1P4-201ENST00000425374 344 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC012497.1-201ENST00000429392 575 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 CETN4P-201ENST00000432407 469 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AL353718.1-201ENST00000451028 517 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC002400.1-201ENST00000569310 726 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 MTND4LP24-201ENST00000572277 291 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC105224.1-201ENST00000587055 421 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC017083.3-201ENST00000609955 700 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC027335.2-201ENST00000624030 375 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AC068057.2-201ENST00000624047 895 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 AL359740.1-201ENST00000624340 592 ntBASIC0.05□□□□□ -2.4
LINC01546A6NGU7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
LINC01546A6NGU7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.04□□□□□ -2.4
LINC01546A6NGU7 RNU6-1331P-201ENST00000363658 106 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 RPL23AP32-201ENST00000395315 459 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 MIR548J-201ENST00000408833 112 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 AL449283.1-202ENST00000418249 604 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 MTCYBP7-201ENST00000419540 1134 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 RPS20P10-201ENST00000451209 253 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 TPRKBP1-201ENST00000456243 481 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01546A6NGU7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.04□□□□□ -2.4
LINC01546A6NGU7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01546A6NGU7 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 ATP5EP1-201ENST00000510257 156 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01546A6NGU7 RNU6-991P-201ENST00000516168 107 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 AC087854.1-201ENST00000519706 414 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.04□□□□□ -2.4
LINC01546A6NGU7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.04□□□□□ -2.4
LINC01546A6NGU7 AC069114.2-201ENST00000604699 304 ntBASIC0.04□□□□□ -2.4
LINC01546A6NGU7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms