Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AF228730.1-201ENST00000397972 663 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AL079342.1-201ENST00000401460 267 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AL049545.1-201ENST00000401856 572 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 SNORA11.4-201ENST00000408823 129 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 ZNF90P2-204ENST00000419323 1075 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 MED14P1-201ENST00000430517 648 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 CETN4P-201ENST00000432407 469 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AL022238.1-201ENST00000442557 355 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 RPS27AP8-201ENST00000452665 445 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 CECR9-201ENST00000453421 199 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 snoU13.15-201ENST00000459407 104 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AC087588.1-201ENST00000462203 316 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 MTND4LP3-201ENST00000468320 276 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 SEM1P1-201ENST00000506694 209 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 RNA5SP337-201ENST00000517007 109 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AP000889.2-201ENST00000532684 490 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AC078814.3-201ENST00000553036 491 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AP000787.2-201ENST00000604432 568 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 AC121334.2-201ENST00000605387 271 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-884P-201ENST00000363889 107 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-512P-201ENST00000364438 103 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 RNU1-109P-201ENST00000383960 147 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 RNU5A-2P-201ENST00000384337 116 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 MIR627-201ENST00000384979 97 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AL023284.1-201ENST00000403956 276 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 RNU4-26P-201ENST00000410270 107 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 RPL19P1-201ENST00000411635 428 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 SKA2P1-201ENST00000425592 390 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 ELOCP14-201ENST00000428070 331 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 Z98742.2-201ENST00000431564 187 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 ELOCP7-201ENST00000439968 331 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 RPL23AP20-201ENST00000447965 421 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 FABP5P15-201ENST00000453566 214 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 RNU7-23P-201ENST00000459465 62 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 RPS27P26-201ENST00000494583 239 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AC092436.1-201ENST00000506450 503 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 IGKV3-31-201ENST00000523109 329 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 MRPS36P5-201ENST00000551909 298 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AL359212.1-201ENST00000556608 614 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AC009977.1-201ENST00000586015 570 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AC004805.2-201ENST00000605382 482 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AC034102.8-201ENST00000615146 484 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 MIR6132-201ENST00000622083 109 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 AC097520.1-201ENST00000624435 385 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 U2.21-201ENST00000637295 81 ntBASIC2.34□□□□□ -2.03
SMIM28A0A1B0GU29 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SMIM28A0A1B0GU29 MTND4P4-201ENST00000439033 1366 ntBASIC2.34□□□□□ -2.04
SMIM28A0A1B0GU29 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 UBE2L2-201ENST00000254302 429 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-188P-201ENST00000364207 107 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 Y_RNA.245-201ENST00000364493 95 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 MIR767-201ENST00000390228 109 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 FCF1P10-201ENST00000407590 479 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AL589872.1-201ENST00000426602 288 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 SNRPEP9-201ENST00000436794 238 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 PGBD4P3-201ENST00000440731 581 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 snoU13.26-201ENST00000459452 105 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 RNU6-1220P-201ENST00000517126 108 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC022878.1-201ENST00000530684 149 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AP000873.5-201ENST00000533906 236 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 AC007834.2-201ENST00000536310 343 ntBASIC2.33□□□□□ -2.04
SMIM28A0A1B0GU29 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms