Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 ISCA1P6-201ENST00000427740 390 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 USP12PX-201ENST00000432383 1057 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 MTCO1P19-201ENST00000443487 500 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC010095.1-201ENST00000443543 144 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 WASF1P1-201ENST00000447560 1131 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 GAPDHP17-201ENST00000449858 1001 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 snoU13.26-201ENST00000459452 105 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC073901.1-201ENST00000462471 408 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC116337.2-201ENST00000477662 156 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC093534.1-201ENST00000504977 132 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 NDUFB4P2-201ENST00000509515 391 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 MTND5P13-201ENST00000513046 1079 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AP003467.2-201ENST00000520175 319 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC022616.3-201ENST00000523940 148 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 ATP5F1P5-201ENST00000526403 760 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 OR5BN1P-201ENST00000532955 829 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC093012.1-202ENST00000549403 582 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 TRAV28-201ENST00000557548 323 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 MIR3167-201ENST00000579623 85 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 MIR3609-201ENST00000582661 80 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 HMGN2P15-201ENST00000585707 270 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC098826.3-201ENST00000603823 466 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC121334.2-201ENST00000605387 271 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC068276.1-201ENST00000605793 379 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-87P-201ENST00000607561 108 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 AC025594.3-201ENST00000613068 790 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 MTND5P6-201ENST00000422338 1798 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 ELL2P3-201ENST00000457883 1602 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 TEX21P-201ENST00000447107 1476 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC103988.1-201ENST00000566382 2177 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-223P-201ENST00000362830 107 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RNU5E-6P-201ENST00000365574 115 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 SNORA75-201ENST00000384158 137 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-217P-201ENST00000384164 104 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-198P-201ENST00000384258 104 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-140P-201ENST00000384566 108 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 SNORA1.3-201ENST00000384676 136 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 SNORA80E-201ENST00000384744 137 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 MIR221-201ENST00000385135 110 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RNU2-33P-201ENST00000410344 192 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 Y_RNA.598-201ENST00000410480 95 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 BX295541.1-201ENST00000417774 250 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RPL7P37-201ENST00000425095 738 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC009414.1-201ENST00000427200 443 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AL714022.1-201ENST00000439897 151 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC108059.3-201ENST00000456388 214 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC104472.2-201ENST00000469035 601 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RPL23AP41-201ENST00000484754 458 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RPL9P6-201ENST00000492764 598 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC092436.1-201ENST00000506450 503 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RAC1P5-201ENST00000512182 576 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 SNORA31.3-201ENST00000516029 96 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 Y_RNA.695-201ENST00000516715 107 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RN7SKP258-201ENST00000517151 304 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 HMGN1P28-201ENST00000521340 364 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 OR5B19P-201ENST00000531766 928 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 PRELID2P1-201ENST00000552837 301 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 RSL24D1P11-201ENST00000591045 491 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 BNIP3P8-201ENST00000597863 560 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC073544.2-201ENST00000601155 540 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 SEPT7P9-203ENST00000604116 343 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 AC104763.2-201ENST00000604179 382 ntBASIC1.84□□□□□ -2.11
TRAV40A0A0B4J280 NUTF2P8-201ENST00000604593 363 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms