Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AP003034.1-201ENST00000534621 422 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC107016.2-201ENST00000547968 190 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AL512310.1-201ENST00000548639 172 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AL121579.1-201ENST00000555129 305 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AL512360.1-201ENST00000555346 234 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AL133153.1-201ENST00000557756 303 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 FAM60BP-201ENST00000578364 658 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR3690-201ENST00000580266 75 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC007363.1-201ENST00000604736 620 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC093788.1-201ENST00000609356 927 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR6817-201ENST00000615588 66 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC104985.2-201ENST00000620598 500 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AL136313.1-201ENST00000624804 202 ntBASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHAC2Q9Y5I4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-1085P-201ENST00000363576 107 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 Y_RNA.295-201ENST00000364918 102 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-74P-201ENST00000384235 107 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR1-2-201ENST00000384961 85 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-882P-201ENST00000391025 103 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 RNA5SP21-201ENST00000410917 96 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 MTATP6P18-201ENST00000417994 673 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 MTND3P23-201ENST00000431980 347 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 RPL23AP20-201ENST00000447965 421 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 MTCO2P29-201ENST00000465212 189 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AL049714.1-201ENST00000466686 347 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 RPL31P58-201ENST00000469001 379 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AC090525.1-201ENST00000479116 478 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 HMGB1P22-201ENST00000505315 124 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AC098799.2-201ENST00000509466 868 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AC010493.1-201ENST00000513479 292 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 SNORA20.3-201ENST00000516880 132 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-835P-201ENST00000516974 104 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 FAM60DP-201ENST00000524174 632 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 MTND1P35-201ENST00000526739 508 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AL136164.4-201ENST00000625013 2135 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AL008636.1-201ENST00000625038 1018 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 DDX10P1-201ENST00000448545 1933 ntBASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHAC2Q9Y5I4 AP001350.1-201ENST00000601906 1524 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU1-35P-201ENST00000362782 153 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-797P-201ENST00000363101 109 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-511P-201ENST00000363496 107 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-173P-201ENST00000364215 104 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 SNORA46-201ENST00000384762 135 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-754P-201ENST00000391166 107 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-1158P-201ENST00000391167 107 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RPS3AP24-201ENST00000407896 734 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNA5SP508-201ENST00000411327 119 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU2-71P-201ENST00000411395 189 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 AC245054.2-201ENST00000415639 319 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 USP9YP27-201ENST00000418455 438 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 AC137499.1-201ENST00000427602 88 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 MTCO3P18-201ENST00000440206 761 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 AL513328.1-201ENST00000446460 224 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 AL136380.1-201ENST00000447970 162 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 AC010265.1-201ENST00000513509 211 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-390P-201ENST00000516259 103 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RNU6-358P-201ENST00000516564 75 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR4435-1-201ENST00000582552 80 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR4719-201ENST00000585233 84 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 AF038458.1-201ENST00000588406 262 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 RMST_3.1-201ENST00000611651 109 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 AL020991.1-201ENST00000612314 373 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 AC093838.1-201ENST00000613014 469 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 MIR6130-201ENST00000619419 109 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 AC009161.2-201ENST00000624626 138 ntBASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHAC2Q9Y5I4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms