Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR208A-201ENST00000362287 71 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-778P-201ENST00000363269 103 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 SNORD14B-201ENST00000364533 90 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 SNORD116-11-201ENST00000383882 92 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 Y_RNA.384-201ENST00000383909 102 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 Y_RNA.529-201ENST00000384586 119 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AL356057.2-201ENST00000403318 432 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 RPL5P18-201ENST00000406671 891 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 UBE2V1P4-201ENST00000425374 344 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 GOT2P5-201ENST00000433995 546 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 HMGN2P20-201ENST00000437531 273 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AC006011.1-201ENST00000442758 349 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AC107399.1-201ENST00000451226 265 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 CYCSP30-201ENST00000546447 172 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 LINC00933-203ENST00000559812 219 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR3942-201ENST00000585264 109 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 OR1M4P-201ENST00000589199 287 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 NUTF2P8-201ENST00000604593 363 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 HSPE1P7-201ENST00000604681 321 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AC012468.1-201ENST00000604888 430 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AL132765.2-201ENST00000610812 351 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AL138726.1-201ENST00000614873 333 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 AC103858.2-201ENST00000621471 543 ntBASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-562P-201ENST00000362731 107 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-1252P-201ENST00000363054 104 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-884P-201ENST00000363889 107 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-1303P-201ENST00000364841 107 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 SNORA75B-201ENST00000384053 137 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AL138878.1-201ENST00000405131 347 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 SNORA57.3-201ENST00000411095 141 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AL096701.2-201ENST00000416920 238 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AL159169.1-201ENST00000421119 127 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AL353729.1-201ENST00000425044 720 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AC117503.1-201ENST00000472241 394 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AC113155.1-201ENST00000511141 769 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU1-86P-201ENST00000516108 154 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU1-107P-201ENST00000516617 154 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU6-928P-201ENST00000516876 104 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 RNA5SP454-201ENST00000517231 127 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AC026371.1-201ENST00000551867 419 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR5684-201ENST00000585074 65 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 AC064801.1-201ENST00000612025 407 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA9Q9Y5G4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 SNORA63.1-201ENST00000362493 131 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 RNA5SP119-201ENST00000362715 117 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 RNU4-73P-201ENST00000363164 141 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 RNA5SP322-201ENST00000363617 119 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 MIR10A-201ENST00000385043 110 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 AL592148.1-201ENST00000413568 445 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 AC099548.1-201ENST00000421443 426 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 YME1L1P1-201ENST00000429435 297 ntBASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA9Q9Y5G4 RPL32P28-201ENST00000443577 397 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms