Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 BTF3L4P3-201ENST00000418879 476 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AL353729.1-201ENST00000425044 720 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 PTGES3P4-201ENST00000426243 356 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AC104563.1-201ENST00000476147 376 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AC079203.1-201ENST00000487972 404 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 RPS15AP36-201ENST00000492022 382 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AC116337.1-201ENST00000509680 687 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AC093281.2-201ENST00000510153 597 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 RNU6-250P-201ENST00000516958 103 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AK6P1-201ENST00000540219 478 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 MIR3126-201ENST00000577443 74 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AL161798.1-201ENST00000604630 131 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AF129408.1-201ENST00000608767 431 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AC005296.1-201ENST00000616145 209 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AC012150.2-201ENST00000621300 544 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 AL158801.5-201ENST00000623123 465 ntBASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
HDGFL3Q9Y3E1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 RNU6-748P-201ENST00000384648 107 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 MIR147B-201ENST00000390185 80 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 RPL31P63-201ENST00000422565 375 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AL353689.1-201ENST00000438895 199 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 MTATP6P30-201ENST00000443540 664 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AC034222.1-201ENST00000494052 532 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 EEF1A1P37-201ENST00000522748 715 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AP003049.1-201ENST00000529418 457 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AC233702.2-202ENST00000562547 291 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AC116312.1-201ENST00000606841 314 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AL512506.1-201ENST00000613918 449 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 ZNF702P-202ENST00000434269 1966 ntBASIC1.54□□□□□ -2.16
HDGFL3Q9Y3E1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 MIR1289-2-201ENST00000408360 111 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 RN7SKP284-201ENST00000411002 343 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 ISCA1P1-201ENST00000426679 387 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC009238.1-201ENST00000442165 424 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC009237.6-201ENST00000446969 424 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 FABP5P15-201ENST00000453566 214 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC008481.1-201ENST00000463278 396 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC117503.1-201ENST00000472241 394 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC018437.1-201ENST00000492214 406 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 RPL22P13-201ENST00000493291 347 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC091965.2-201ENST00000512324 613 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 SMURF2P1-201ENST00000514992 481 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AP003355.1-201ENST00000518956 587 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC023538.1-201ENST00000534576 736 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AL121821.2-201ENST00000556081 394 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 MIR4299-201ENST00000577899 72 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 MTCYBP22-201ENST00000603788 447 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC098826.3-201ENST00000603823 466 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC099785.1-201ENST00000605697 437 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC091834.1-201ENST00000614543 472 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AL109620.1-201ENST00000618738 1197 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 MIR5739-201ENST00000619803 80 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC231657.1-201ENST00000624313 397 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AL356094.1-201ENST00000624663 1212 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 AC091948.2-201ENST00000636510 279 ntBASIC1.53□□□□□ -2.16
HDGFL3Q9Y3E1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.17
HDGFL3Q9Y3E1 AL390862.1-201ENST00000635467 1469 ntBASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.52□□□□□ -2.17
HDGFL3Q9Y3E1 snoZ40.1-201ENST00000364540 72 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms