Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AP003399.1-201ENST00000637534 361 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAPPC4Q9Y296 AL359693.1-201ENST00000614959 2407 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 MTND5P29-201ENST00000458676 1807 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 Y_RNA.245-201ENST00000364493 95 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 SNORA67.1-201ENST00000364749 141 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 RNY4P16-201ENST00000364768 94 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 RNU5E-5P-201ENST00000365379 116 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 SNORA67.4-201ENST00000384688 142 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AL513475.1-201ENST00000406602 315 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 ISCA1P1-201ENST00000426679 387 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 SNRPEP9-201ENST00000436794 238 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 WASF1P1-201ENST00000447560 1131 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 KATNBL1P6-201ENST00000453433 915 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 MTND4LP3-201ENST00000468320 276 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 RN7SL636P-201ENST00000497504 294 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 GZMAP1-201ENST00000503054 631 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC010486.2-201ENST00000505572 483 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC234781.5-201ENST00000508429 271 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC113155.1-201ENST00000511141 769 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AF131216.2-201ENST00000512316 564 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC109329.2-201ENST00000519658 482 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC021269.2-201ENST00000532318 330 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 ARL2BPP2-201ENST00000550907 489 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AL359212.1-201ENST00000556608 614 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC027176.1-201ENST00000560204 514 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC105137.2-201ENST00000569073 466 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 MIR3915-201ENST00000578518 97 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AP001981.2-201ENST00000603241 418 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC098826.3-201ENST00000603823 466 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AP000860.1-201ENST00000605250 559 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AL031775.1-201ENST00000607014 887 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC027807.2-201ENST00000616099 408 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 AC099654.13-201ENST00000639774 207 ntBASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
TRAPPC4Q9Y296 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 CR848007.1-201ENST00000442354 1699 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 MTND4P4-201ENST00000439033 1366 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 Y_RNA.169-201ENST00000363745 96 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 RNU4-1-201ENST00000363925 141 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 RNU6-14P-201ENST00000384630 106 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 UBE2V1P2-201ENST00000397758 440 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC009963.1-201ENST00000417265 157 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 MED14P1-201ENST00000430517 648 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AL445687.1-201ENST00000439946 251 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 MTND1P30-201ENST00000441241 901 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 FABP5P15-201ENST00000453566 214 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 SNORD97-201ENST00000459187 142 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC098862.1-201ENST00000504991 413 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC114786.4-201ENST00000508771 728 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 FABP5P5-201ENST00000515537 406 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC022878.1-201ENST00000530684 149 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AP003122.4-201ENST00000530980 758 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AP000889.2-201ENST00000532684 490 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 ROCK1P1-201ENST00000573767 549 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 MIR5007-201ENST00000583098 95 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC012065.4-201ENST00000602445 679 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AL358072.1-201ENST00000604156 575 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC112191.3-201ENST00000604371 277 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC012360.2-201ENST00000609349 391 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC025594.3-201ENST00000613068 790 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 AC009878.1-201ENST00000621819 340 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 U2.21-201ENST00000637295 81 ntBASIC2.12□□□□□ -2.07
TRAPPC4Q9Y296 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms