Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SNORD5.1-201ENST00000458800 75 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 RNU7-59P-201ENST00000459101 61 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 RNU6-714P-201ENST00000516963 103 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.715-201ENST00000517082 110 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 IGKV2-26-201ENST00000518305 343 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AP003385.6-201ENST00000531603 374 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AC006600.1-201ENST00000572529 153 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 MIR7851-201ENST00000610611 160 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 RNF6P1-201ENST00000444889 1784 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 MT-TW-201ENST00000387382 68 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AL360182.1-201ENST00000397433 468 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 RNU6-1156P-201ENST00000410365 100 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 RPS15AP10-201ENST00000432472 382 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AL035551.1-201ENST00000446931 348 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 HMGB1P21-201ENST00000502313 581 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AC025445.1-201ENST00000502728 300 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 RNU6-256P-201ENST00000516747 97 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 RNU6-579P-201ENST00000516879 102 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AC067852.3-201ENST00000589177 561 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 MTND4LP5-201ENST00000605152 292 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 DUSP12P1-201ENST00000612874 516 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 AP003355.3-201ENST00000623465 114 ntBASIC2.67□□□□□ -1.98
NOTCH3Q9UM47 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 RMST-202ENST00000541282 2099 ntTSL 2 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 RNU6-666P-201ENST00000363499 107 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.389-201ENST00000383924 113 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 RNU6-1050P-201ENST00000410388 107 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 RNU6-272P-201ENST00000411028 104 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 OR2AS1P-201ENST00000427827 319 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AL158071.1-201ENST00000430315 461 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AC098831.1-201ENST00000440661 216 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 RPS15AP27-201ENST00000449183 343 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 HMGB1P15-201ENST00000453854 435 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AP005435.4-201ENST00000529514 284 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 OR4P1P-201ENST00000530808 1136 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 BRDTP1-201ENST00000605735 677 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AC010378.1-201ENST00000619270 362 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AC132825.6-201ENST00000638861 357 ntBASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.66□□□□□ -1.98
NOTCH3Q9UM47 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 AL353743.1-202ENST00000431724 1695 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 KPNA2P2-201ENST00000419546 1489 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 RNU6-1159P-201ENST00000362933 107 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.512-201ENST00000384518 102 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 RNU2-36P-201ENST00000410361 191 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 RNU2-71P-201ENST00000411395 189 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 AC010469.1-201ENST00000463864 576 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 RNU6-189P-201ENST00000516120 101 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 RNA5SP384-201ENST00000516615 116 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 COX6CP8-201ENST00000522620 226 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 AC008126.1-201ENST00000549019 480 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 AL773545.4-201ENST00000637262 310 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 AL513478.4-201ENST00000641636 310 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 AL161431.1-201ENST00000618966 4205 ntBASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
NOTCH3Q9UM47 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms