Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC078795.3-201ENST00000602913 472 ntBASIC4.03□□□□□ -1.76
USP25Q9UHP3 AC245389.1-201ENST00000605141 529 ntBASIC4.03□□□□□ -1.76
USP25Q9UHP3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.03□□□□□ -1.76
USP25Q9UHP3 MIR1302-2-201ENST00000607096 138 ntBASIC4.03□□□□□ -1.76
USP25Q9UHP3 AL022345.1-201ENST00000607292 135 ntBASIC4.03□□□□□ -1.76
USP25Q9UHP3 AL589994.2-201ENST00000621124 579 ntBASIC4.03□□□□□ -1.76
USP25Q9UHP3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.03□□□□□ -1.76
USP25Q9UHP3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP25Q9UHP3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP25Q9UHP3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP25Q9UHP3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP25Q9UHP3 RNU6-1227P-201ENST00000383981 107 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 Y_RNA.431-201ENST00000384086 102 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 RNU2-33P-201ENST00000410344 192 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 RNU6-387P-201ENST00000411331 105 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC093578.1-201ENST00000415219 368 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AL354751.2-201ENST00000415471 210 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 HSPE1P1-201ENST00000421494 318 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 AP000907.1-201ENST00000428428 510 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC007919.1-201ENST00000429380 217 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AL512844.2-201ENST00000433990 593 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 HMGB1P18-201ENST00000438801 619 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC125238.1-201ENST00000448842 249 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AL590639.1-201ENST00000456484 337 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 RPL37P6-201ENST00000460682 294 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AL160314.1-201ENST00000490836 438 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 SNORA31.3-201ENST00000516029 96 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 SCARNA15.1-201ENST00000516384 125 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC026333.2-201ENST00000542164 106 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC099778.2-201ENST00000610904 211 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC007998.5-201ENST00000622938 237 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC011155.2-201ENST00000623202 216 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 AC103710.2-202ENST00000641454 2853 ntBASIC4.02□□□□□ -1.77
USP25Q9UHP3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
USP25Q9UHP3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP25Q9UHP3 AL049641.1-201ENST00000441055 1948 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP25Q9UHP3 RNU4-66P-201ENST00000365199 138 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 SNORD115-7-201ENST00000365306 82 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 RNU6-61P-201ENST00000365528 109 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 MIR23A-201ENST00000385245 73 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 Z82210.1-201ENST00000440037 231 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 PIGFP3-201ENST00000441918 722 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC012181.1-201ENST00000479895 423 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 RPL32P34-201ENST00000486380 400 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 RPL7P20-201ENST00000520308 745 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 IGHV3-76-201ENST00000522465 295 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 OR5B10P-201ENST00000532869 642 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC104763.2-201ENST00000604179 382 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC113139.1-201ENST00000605049 239 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC034102.8-201ENST00000615146 484 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC006111.3-201ENST00000622137 383 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 AC025034.2-201ENST00000623264 286 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.01□□□□□ -1.77
USP25Q9UHP3 ZNF826P-207ENST00000622273 1910 ntBASIC4.01□□□□□ -1.77
USP25Q9UHP3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
USP25Q9UHP3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4□□□□□ -1.77
USP25Q9UHP3 Y_RNA.58-201ENST00000362807 102 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 Y_RNA.154-201ENST00000363624 102 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 RNY3P1-201ENST00000365085 102 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 RNY3-201ENST00000365484 102 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 SNORA24.1-201ENST00000384401 135 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 Y_RNA.490-201ENST00000384413 102 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 RNU6-831P-201ENST00000384548 107 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 MIR325-201ENST00000385260 98 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4□□□□□ -1.77
USP25Q9UHP3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4□□□□□ -1.77
USP25Q9UHP3 BTF3L4P3-201ENST00000418879 476 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4□□□□□ -1.77
USP25Q9UHP3 RPL23AP69-201ENST00000431134 458 ntBASIC4□□□□□ -1.77
USP25Q9UHP3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4□□□□□ -1.77
USP25Q9UHP3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms