Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 SNRPGP12-201ENST00000449481 213 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 BNIP3P16-201ENST00000589779 534 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AL138880.2-201ENST00000616214 239 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AC121333.1-201ENST00000567488 2709 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 MTCO1P56-201ENST00000401674 224 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 RPL21P66-201ENST00000426566 466 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 SNORD124-201ENST00000459577 104 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 RNU6-964P-201ENST00000516524 69 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 SNORA44.1-201ENST00000517031 108 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AP006587.4-201ENST00000526053 529 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 MIR153-2-201ENST00000385225 87 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AL031577.2-201ENST00000404133 280 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 TRGV6-201ENST00000417928 299 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 TMEM167AP1-201ENST00000423409 219 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AC241584.1-201ENST00000438469 1241 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 DYNLT3P2-201ENST00000442517 295 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 PRPS1P1-201ENST00000445305 876 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AC109635.4-202ENST00000531666 412 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 COX6CP3-201ENST00000580869 223 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AL355812.1-201ENST00000603215 216 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AC104763.3-201ENST00000613765 618 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AC012676.2-201ENST00000619258 186 ntBASIC0.36□□□□□ -2.35
CHD7Q9P2D1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.35□□□□□ -2.35
CHD7Q9P2D1 AGGF1P5-201ENST00000567900 919 ntBASIC0.35□□□□□ -2.35
CHD7Q9P2D1 MIR4299-201ENST00000577899 72 ntBASIC0.35□□□□□ -2.35
CHD7Q9P2D1 SNORD14A-201ENST00000606526 91 ntBASIC0.35□□□□□ -2.35
CHD7Q9P2D1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.35□□□□□ -2.35
CHD7Q9P2D1 RPS25P9-201ENST00000435591 252 ntBASIC0.35□□□□□ -2.35
CHD7Q9P2D1 OR10V3P-201ENST00000525712 725 ntBASIC0.35□□□□□ -2.35
CHD7Q9P2D1 AL121839.1-201ENST00000556233 1185 ntBASIC0.35□□□□□ -2.35
CHD7Q9P2D1 AC136932.1-201ENST00000574771 208 ntBASIC0.35□□□□□ -2.35
CHD7Q9P2D1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
CHD7Q9P2D1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
CHD7Q9P2D1 UBE2V2P3-201ENST00000433562 437 ntBASIC0.34□□□□□ -2.35
CHD7Q9P2D1 ANKRD26P4-201ENST00000455755 950 ntBASIC0.34□□□□□ -2.35
CHD7Q9P2D1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.34□□□□□ -2.35
CHD7Q9P2D1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.34□□□□□ -2.35
CHD7Q9P2D1 MIR5190-201ENST00000581537 80 ntBASIC0.34□□□□□ -2.35
CHD7Q9P2D1 CLIC4P2-201ENST00000601934 717 ntBASIC0.34□□□□□ -2.35
CHD7Q9P2D1 AC040174.2-201ENST00000602701 465 ntBASIC0.34□□□□□ -2.35
CHD7Q9P2D1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
CHD7Q9P2D1 RNU4-73P-201ENST00000363164 141 ntBASIC0.34□□□□□ -2.36
CHD7Q9P2D1 RNU6-39P-201ENST00000384344 107 ntBASIC0.34□□□□□ -2.36
CHD7Q9P2D1 SNORA8.3-201ENST00000384679 139 ntBASIC0.34□□□□□ -2.36
CHD7Q9P2D1 AC092393.1-201ENST00000439625 742 ntBASIC0.34□□□□□ -2.36
CHD7Q9P2D1 AC022690.1-201ENST00000526681 550 ntBASIC0.34□□□□□ -2.36
CHD7Q9P2D1 AL138726.1-201ENST00000614873 333 ntBASIC0.34□□□□□ -2.36
CHD7Q9P2D1 AL121890.5-201ENST00000620848 304 ntBASIC0.34□□□□□ -2.36
CHD7Q9P2D1 SDAD1P2-201ENST00000441308 2028 ntBASIC0.34□□□□□ -2.36
CHD7Q9P2D1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 SNORA9.1-201ENST00000362412 131 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 Y_RNA.132-201ENST00000363421 102 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 RNY3-201ENST00000365484 102 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 RNU6-72P-201ENST00000384285 79 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 MED14P1-201ENST00000430517 648 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 TPTE2P6-202ENST00000445572 1007 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AC112518.2-201ENST00000508565 425 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AC108676.2-201ENST00000605225 163 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AC068880.5-201ENST00000624331 290 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 RNU6-225P-201ENST00000384613 103 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 MIR32-201ENST00000384965 70 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AL356585.4-201ENST00000623078 1229 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 MIR101-1-201ENST00000362265 75 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AC244098.2-201ENST00000422068 99 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 AC006518.2-201ENST00000542513 940 ntBASIC0.33□□□□□ -2.36
CHD7Q9P2D1 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.33□□□□□ -2.36
CHD7Q9P2D1 RNU1-58P-201ENST00000362413 163 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 RNU6-1305P-201ENST00000364353 104 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 SNORA51.6-201ENST00000384151 125 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 OR9R1P-201ENST00000412200 877 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 TRGVB-201ENST00000453257 471 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AC010627.1-201ENST00000503819 1294 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AC133963.2-201ENST00000513686 578 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 RNU6-362P-201ENST00000516736 90 ntBASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.32□□□□□ -2.36
CHD7Q9P2D1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms