Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AP001330.4-201ENST00000604350 154 ntBASIC3.17□□□□□ -1.9
SMARCAL1Q9NZC9 DISC2.1-201ENST00000612827 205 ntBASIC3.17□□□□□ -1.9
SMARCAL1Q9NZC9 SDR42E1P2-201ENST00000614861 481 ntBASIC3.17□□□□□ -1.9
SMARCAL1Q9NZC9 AC011155.2-201ENST00000623202 216 ntBASIC3.17□□□□□ -1.9
SMARCAL1Q9NZC9 AC025034.2-201ENST00000623264 286 ntBASIC3.17□□□□□ -1.9
SMARCAL1Q9NZC9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCAL1Q9NZC9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCAL1Q9NZC9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SMARCAL1Q9NZC9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
SMARCAL1Q9NZC9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 MTND5P17-201ENST00000418405 1603 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 Y_RNA.576-201ENST00000384781 102 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 MIR181A2-201ENST00000384863 110 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 MIR34B-201ENST00000385076 84 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL591034.1-201ENST00000407447 340 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 RNA5SP120-201ENST00000410900 112 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL158156.1-201ENST00000422509 473 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 DUTP6-201ENST00000425573 462 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC006028.1-201ENST00000438379 402 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 MTND5P20-201ENST00000448677 143 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 MTND3P10-201ENST00000450967 341 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 RPS20P20-201ENST00000460498 340 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC091179.1-201ENST00000461606 579 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC034236.1-201ENST00000469891 373 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 MTCYBP18-201ENST00000501056 747 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC008628.2-201ENST00000502605 298 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC108078.2-201ENST00000510750 236 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 RNU6-711P-201ENST00000517255 106 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AP006587.4-201ENST00000526053 529 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 PSMA2P1-201ENST00000526365 646 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AP005435.4-201ENST00000529514 284 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 SRGNP1-201ENST00000603392 451 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL670379.6-201ENST00000603753 252 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL670379.11-201ENST00000604059 253 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC008162.1-201ENST00000604718 254 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL670379.1-201ENST00000604752 252 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL670379.5-201ENST00000605253 252 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL670379.12-201ENST00000605291 253 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL670379.8-201ENST00000605353 252 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC007619.2-201ENST00000605743 379 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL670379.7-201ENST00000605823 252 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL357078.3-201ENST00000607528 618 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 U6.114-201ENST00000636407 96 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL354685.2-201ENST00000448218 1447 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMARCAL1Q9NZC9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.15□□□□□ -1.9
SMARCAL1Q9NZC9 SNORA63.1-201ENST00000362493 131 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 Y_RNA.86-201ENST00000363020 111 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 RNU6-173P-201ENST00000364215 104 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 SNORD115-7-201ENST00000365306 82 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 SNORD37.1-201ENST00000390968 65 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 RNA5SP274-201ENST00000410484 108 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 RN7SKP58-201ENST00000411010 305 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 AL451074.5-201ENST00000415894 435 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 HSPE1P1-201ENST00000421494 318 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 MTND1P18-201ENST00000448191 573 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 RPL7P5-201ENST00000471472 736 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 HSPE1P6-201ENST00000479457 291 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 RBBP4P6-201ENST00000508098 202 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 Y_RNA.702-201ENST00000516843 96 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 SNORD59.2-201ENST00000516873 68 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 RNA5SP503-201ENST00000517047 117 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 BNIP3P9-201ENST00000603714 553 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 MIR7112-201ENST00000616126 65 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 AL360181.4-201ENST00000621752 134 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 MIR6733-201ENST00000635723 61 ntBASIC3.15□□□□□ -1.91
SMARCAL1Q9NZC9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms